List of clones in pair P012030.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A02Sequence533001245 (24)ref|XP_009768928.1|8e-67PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]654001245 (24)emb|CDO96950.1|5e-58unnamed protein product [Coffea canephora]
JMFF013B21Sequence567001245 (24)ref|XP_009768928.1|5e-77PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]760001245 (24)ref|XP_009768928.1|1e-104PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMFF022N18Sequence437001245 (24)ref|XP_004230885.1|6e-41PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum]682001245 (24)ref|XP_009768928.1|5e-78PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMFF027H14Sequence504001245 (24)ref|XP_004230885.1|2e-37PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum]746001245 (24)ref|XP_009768928.1|2e-101PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMFF050N16Sequence642001245 (24)ref|XP_009590743.1|9e-72PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana tomentosifo568001245 (24)emb|CDO96950.1|2e-53unnamed protein product [Coffea canephora]
JMSF004D06Sequence333001245 (24)ref|XP_009768928.1|7e-21PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]509001245 (24)ref|XP_009768928.1|2e-64PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMSF018I24Sequence400001245 (24)ref|XP_009768928.1|6e-04PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]749001245 (24)ref|XP_009768928.1|1e-113PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMSF041A16Sequence729001245 (24)ref|XP_009768928.1|1e-90PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]629001245 (24)ref|XP_009768928.1|2e-70PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMSF044H11Sequence822001245 (24)ref|XP_009768928.1|3e-125PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]787001245 (24)ref|XP_009768928.1|4e-120PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMSF052H11Sequence642001245 (24)ref|XP_004230885.1|2e-69PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum]966001245 (24)ref|XP_009788094.1|1e-147PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]
JMSF052H12Sequence640001245 (24)ref|XP_004230885.1|6e-69PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum]923001245 (24)ref|XP_009788094.1|3e-139PREDICTED: triosephosphate isomerase, chloroplastic-like [Nicotiana sylvestris]

Contig 1245 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001245============================================1388         
   4 --------------------------------------------->JMFF050N16                                                         
                                                                <----------------------------------------rJMFF050N16  
  21 ----------------------------------->JMFF027H14                                                                   
                                                 <-----------------------------------------------------rJMFF027H14  
  49 --------------------------------------------------->JMSF041A16                                                   
                                                           <------------------------------------------rJMSF041A16  
  79  ----------------------------------------------------------->JMSF044H11                                          
                                            <--------------------------------------------------------rJMSF044H11  
 112        ------------------------------------->JMFF007A02                                                          
                                                         <---------------------------------------------rJMFF007A02  
 112       ------------------------------->JMFF022N18                                                                 
                                                      <------------------------------------------------rJMFF022N18  
 121        ---------------------------------------->JMFF013B21                                                       
                                                 <-----------------------------------------------------rJMFF013B21  
 139        --------------------------------------------->JMSF052H11                                                  
                                <---------------------------------------------------------------------rJMSF052H11  
 150        --------------------------------------------->JMSF052H12                                                  
                                   <-----------------------------------------------------------------rJMSF052H12  
 153       ------------------>JMSF018I24                                                                              
                                              <-----------------------------------------------------rJMSF018I24  
 209        ----------------------->JMSF004D06                                                                        
                                                            <-----------------------------------rJMSF004D06

The following clones don't have the opposite end in this pair.

                                                                   <--------------rJMSF004D08*                        
           ------------------------------------>JMSF018M04*