List of clones in pair P012020.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I01Sequence676010723 (12)ref|XP_006418328.1|1e-93hypothetical protein EUTSA_v10008324mg [Eutrema salsugineum] ref|XP_006418329.1|
JMFF008G18Sequence388010723 (12)ref|XP_009783956.1|4e-22PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like788010723 (12)ref|XP_006418328.1|1e-110hypothetical protein EUTSA_v10008324mg [Eutrema salsugineum] ref|XP_006418329.1|
JMFF017E20Sequence544010723 (12)gb|AIL30484.1|1e-65ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Nicotiana taba830010723 (12)ref|XP_006418328.1|4e-118hypothetical protein EUTSA_v10008324mg [Eutrema salsugineum] ref|XP_006418329.1|
JMFN025B15Sequence611010723 (12)gb|AIL30484.1|1e-84ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Nicotiana taba
JMSF009G19Sequence376010723 (12)gb|KFK42613.1|1e-80atp-dependent clp protease proteolytic subunit [Arabis alpina]675010723 (12)ref|XP_006418328.1|1e-102hypothetical protein EUTSA_v10008324mg [Eutrema salsugineum] ref|XP_006418329.1|
JMSF025I09Sequence637010723 (12)gb|AIL30484.1|1e-75ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Nicotiana taba758010723 (12)ref|XP_006418328.1|5e-113hypothetical protein EUTSA_v10008324mg [Eutrema salsugineum] ref|XP_006418329.1|
JMSF041I15Sequence785010723 (12)gb|AIL30484.1|2e-128ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Nicotiana taba664010723 (12)ref|XP_006418328.1|9e-102hypothetical protein EUTSA_v10008324mg [Eutrema salsugineum] ref|XP_006418329.1|

Contig 10723 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010723============================================1316         
  47 ----------------------------------------------->JMSF025I09                                                       
                                            <--------------------------------------------------------rJMSF025I09  
  60      ---------------------------->JMFF008G18                                                                     
                                             <-----------------------------------------------------------rJMFF008G18  
  60      ---------------------------------------->JMFF017E20                                                         
                                          <--------------------------------------------------------------rJMFF017E20  
 204      ----------------------------------------------------------->JMSF041I15                                      
                                             <------------------------------------------------rJMSF041I15  
 641                                           ---------------------------->JMSF009G19                                
                                               <--------------------------------------------------rJMSF009G19

The following clones don't have the opposite end in this pair.

                                                  <--------------------------------------------------rJMFF001I01-     
          ---------------------------------------------->JMFN025B15-