clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF016G05 | Sequence | 588 | 012299 (18) | ref|XP_009605541.1| | 7e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | 555 | 012299 (18) | ref|XP_009605541.1| | 5e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] |
JMFF020N07 | Sequence | 586 | 012299 (18) | ref|XP_009605541.1| | 7e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | 573 | 012299 (18) | ref|XP_009605541.1| | 6e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] |
JMFF033B21 | Sequence | 613 | 012299 (18) | ref|XP_009605541.1| | 2e-52 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | 631 | 012299 (18) | ref|XP_009605541.1| | 3e-36 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] |
JMFF046N08 | Sequence | 529 | 012299 (18) | ref|XP_009605541.1| | 4e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | 423 | 012299 (18) | ref|XP_009772850.1| | 2e-21 | PREDICTED: probable steroid-binding protein 3 [Nicotiana sylvestris] |
JMFN009P22 | Sequence | 609 | 012299 (18) | ref|XP_009605541.1| | 9e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | |||||
JMFN029N24 | Sequence | 592 | 012299 (18) | ref|XP_009605541.1| | 8e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | |||||
JMFN033A06 | Sequence | 571 | 012299 (18) | ref|XP_009605541.1| | 6e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | |||||
JMFN035H08 | Sequence | 524 | 012299 (18) | ref|XP_009605541.1| | 3e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | |||||
JMSF003N24 | Sequence | 378 | 012299 (18) | ref|XP_009605541.1| | 6e-54 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | 536 | 012299 (18) | ref|XP_009605541.1| | 4e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] |
JMSF004F01 | Sequence | 445 | 012299 (18) | ref|XP_009605541.1| | 1e-53 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | |||||
JMSF035P22 | Sequence | 682 | 012299 (18) | ref|XP_009605541.1| | 2e-52 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] | 677 | 012299 (18) | ref|XP_009605541.1| | 2e-52 | PREDICTED: probable steroid-binding protein 3 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012299============================================ 709 31 ----------------------------------------------------------------------------------------------->JMSF035P22 <-----------------------------------------------------------------------------------------------rJMSF035P22 77 -------------------------------------------------------------------------------------->JMFF033B21 <----------------------------------------------------------------------------------------rJMFF033B21 123 -------------------------------------------------------------------------->JMFF046N08 <-------------------------------------------------------rJMFF046N08 153 --------------------------------------------------------------------------------->JMFF016G05 <-----------------------------------------------------------------------------rJMFF016G05 159 --------------------------------------------------------------------------------->JMFF020N07 <--------------------------------------------------------------------------------rJMFF020N07 171 ---------------------------------------------------->JMSF003N24 <---------------------------------------------------------------------------rJMSF003N24
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------------->JMSF018F16* -------------------------------------------------------------->JMSF004F01- --------------------------------------------------------------------------------->JMFN029N24- -------------------------------------------------------------------------------->JMFN033A06- ------------------------------------------------------------------------->JMFN035H08- ------------------------------------------------------------------------------------->JMFN009P22-