clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF049B10 | Sequence | 637 | 011210 (6) | ref|XP_006419270.1| | 1e-76 | hypothetical protein CICLE_v10005764mg [Citrus clementina] ref|XP_006488758.1| P | 644 | 011210 (6) | ref|XP_007223746.1| | 5e-31 | hypothetical protein PRUPE_ppa010512mg [Prunus persica] ref|XP_008223460.1| PRED |
JMSF013J20 | Sequence | 396 | 011210 (6) | ref|XP_006488759.1| | 4e-24 | PREDICTED: methyltransferase-like protein 13-like isoform X3 [Citrus sinensis] | 685 | 011210 (6) | ref|XP_004973949.1| | 9e-09 | PREDICTED: methyltransferase-like protein 13-like [Setaria italica] |
JMSF015H18 | Sequence | 466 | 011210 (6) | ref|XP_006488759.1| | 5e-33 | PREDICTED: methyltransferase-like protein 13-like isoform X3 [Citrus sinensis] | 768 | 011210 (6) | ref|XP_004973949.1| | 1e-08 | PREDICTED: methyltransferase-like protein 13-like [Setaria italica] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011210============================================1443 44 ------------------------------------------->JMFF049B10 <----------------------------------rJMFF049B10 98 ----------------------------->JMSF015H18 <--------------------------------------------------rJMSF015H18 105 -------------------------->JMSF013J20 <----------------------------------------------rJMSF013J20
The following clones don't have the opposite end in this pair.