clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN004N02 | Sequence | 617 | 008688 (18) | ref|XP_011077433.1| | 1e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] | |||||
JMFN031J16 | Sequence | 548 | 008688 (18) | ref|XP_006436065.1| | 3e-58 | hypothetical protein CICLE_v10032980mg [Citrus clementina] ref|XP_006436066.1| h | |||||
JMFS169F08 | Sequence | 609 | 008688 (18) | ref|XP_011077433.1| | 1e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] | |||||
JMSF002I17 | Sequence | 382 | 008688 (18) | ref|XP_011094806.1| | 4e-38 | PREDICTED: 60S ribosomal protein L23A [Sesamum indicum] | 631 | 008688 (18) | ref|XP_011077433.1| | 3e-58 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] |
JMSF011G02 | Sequence | 416 | 008688 (18) | ref|XP_006436068.1| | 1e-30 | hypothetical protein CICLE_v10032980mg [Citrus clementina] gb|ESR49308.1| hypoth | 599 | 008688 (18) | ref|XP_006436065.1| | 2e-57 | hypothetical protein CICLE_v10032980mg [Citrus clementina] ref|XP_006436066.1| h |
JMSF015M02 | Sequence | 255 | 008688 (18) | emb|CDP16514.1| | 3e-09 | unnamed protein product [Coffea canephora] emb|CDP16331.1| unnamed protein produ | 685 | 008688 (18) | ref|XP_011077433.1| | 1e-58 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] |
JMSF026J01 | Sequence | 671 | 008688 (18) | ref|XP_011077433.1| | 9e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] | 634 | 008688 (18) | ref|XP_011077433.1| | 6e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] |
JMSF041P24 | Sequence | 661 | 008688 (18) | ref|XP_011077433.1| | 8e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] | 599 | 008688 (18) | ref|XP_011077433.1| | 4e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] |
JMSF043P21 | Sequence | 632 | 008688 (18) | ref|XP_011077433.1| | 4e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] | 591 | 008688 (18) | ref|XP_011077433.1| | 2e-59 | PREDICTED: 60S ribosomal protein L23a [Sesamum indicum] |
JMSF052L10 | Sequence | 675 | 008688 (18) | ref|XP_006436065.1| | 1e-57 | hypothetical protein CICLE_v10032980mg [Citrus clementina] ref|XP_006436066.1| h | 678 | 008688 (18) | ref|XP_006436065.1| | 2e-57 | hypothetical protein CICLE_v10032980mg [Citrus clementina] ref|XP_006436066.1| h |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008688============================================ 678 7 --------------------------------------------------------------------------------------------------->JMSF052L10 <--------------------------------------------------------------------------------------------------rJMSF052L10 44 ------------------------------------------------------------------------------>JMSF026J01 <---------------------------------------------------------------------------------------------rJMSF026J01 47 ------------------------------------------------------->JMSF002I17 <--------------------------------------------------------------------------------------------rJMSF002I17 76 ------------------------------------------------------------->JMSF011G02 <----------------------------------------------------------------------------------------rJMSF011G02 80 ----------------------------------------------------------------------------->JMSF041P24 <---------------------------------------------------------------------------------------rJMSF041P24 106 ------------------------------------------------------------------------------------------>JMSF043P21 <-----------------------------------------------------------------------------------rJMSF043P21 143 ------------------------------------->JMSF015M02 <------------------------------------------------------------------------------rJMSF015M02
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------------>JMFN004N02- ----------------------------------------------------------------------------------------->JMFS169F08- <-------------------------------------------------------------------------------------------rJMSF051P13* -------------------------------------------------------------------------------->JMFN031J16-