List of clones in pair P011912.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001B13Sequence602002412 (37)emb|CBI24846.3|5e-70unnamed protein product [Vitis vinifera]
JMFF001F07Sequence551002412 (37)ref|XP_006365859.1|2e-85PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]646002412 (37)emb|CBI24846.3|7e-84unnamed protein product [Vitis vinifera]
JMFF006L22Sequence562002412 (37)ref|XP_006365859.1|1e-86PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]757002412 (37)ref|XP_002265394.1|1e-104PREDICTED: 60S ribosomal protein L6-3 [Vitis vinifera]
JMFF007D15Sequence575002412 (37)ref|XP_006365859.1|3e-79PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]329002412 (37)ref|XP_011096185.1|2e-33PREDICTED: 60S ribosomal protein L6-like [Sesamum indicum]
JMFF008B08Sequence558002412 (37)ref|XP_006365859.1|3e-84PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]
JMFF013P18Sequence512002412 (37)gb|KGN53829.1|2e-74hypothetical protein Csa_4G153800 [Cucumis sativus]584002412 (37)emb|CBI24846.3|6e-69unnamed protein product [Vitis vinifera]
JMFF014J02Sequence560002412 (37)ref|XP_006365859.1|1e-86PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]659002412 (37)ref|XP_011096185.1|5e-90PREDICTED: 60S ribosomal protein L6-like [Sesamum indicum]
JMFF022B12Sequence516002412 (37)ref|XP_006365859.1|7e-74PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]722002412 (37)ref|XP_002265394.1|1e-104PREDICTED: 60S ribosomal protein L6-3 [Vitis vinifera]
JMFF024G16Sequence503002412 (37)gb|KGN53829.1|2e-73hypothetical protein Csa_4G153800 [Cucumis sativus]753002412 (37)ref|XP_002265394.1|4e-77PREDICTED: 60S ribosomal protein L6-3 [Vitis vinifera]
JMFF027G03Sequence542002412 (37)ref|XP_006365859.1|2e-81PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]733002412 (37)emb|CBI24846.3|3e-81unnamed protein product [Vitis vinifera]
JMFF030A16Sequence361002412 (37)ref|XP_004236669.1|3e-41PREDICTED: 60S ribosomal protein L6-like [Solanum lycopersicum]761002412 (37)ref|XP_011096185.1|6e-95PREDICTED: 60S ribosomal protein L6-like [Sesamum indicum]
JMFF033B07Sequence481002412 (37)gb|KGN53829.1|5e-68hypothetical protein Csa_4G153800 [Cucumis sativus]717002412 (37)ref|XP_011096185.1|3e-98PREDICTED: 60S ribosomal protein L6-like [Sesamum indicum]
JMFF036M12Sequence567002412 (37)ref|XP_006365859.1|2e-86PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]698002412 (37)emb|CBI24846.3|8e-81unnamed protein product [Vitis vinifera]
JMFF042K08Sequence659002412 (37)ref|XP_006365859.1|3e-92PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]604002412 (37)emb|CBI24846.3|5e-77unnamed protein product [Vitis vinifera]
JMFN010K21Sequence612002412 (37)ref|XP_006365859.1|1e-95PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]
JMFN011P20Sequence622002412 (37)ref|XP_006365859.1|5e-102PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]
JMFN043C03Sequence604002412 (37)emb|CBI24846.3|2e-67unnamed protein product [Vitis vinifera]
JMSF018M01Sequence243002412 (37)ref|XP_006346775.1|3e-18PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]738002412 (37)ref|XP_011096185.1|8e-102PREDICTED: 60S ribosomal protein L6-like [Sesamum indicum]
JMSF021B20Sequence684002412 (37)ref|XP_006365859.1|9e-93PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]761002412 (37)ref|XP_002265394.1|3e-102PREDICTED: 60S ribosomal protein L6-3 [Vitis vinifera]
JMSF021C04Sequence628002412 (37)ref|XP_006365859.1|3e-84PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]772002412 (37)ref|XP_006365859.1|2e-107PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]
JMSF043F16Sequence785002412 (37)ref|XP_006365859.1|2e-111PREDICTED: 60S ribosomal protein L6-like [Solanum tuberosum]755002412 (37)ref|XP_002265394.1|2e-105PREDICTED: 60S ribosomal protein L6-3 [Vitis vinifera]

Contig 2412 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002412============================================ 919         
  28 ------------------------------------------------------------->JMFF036M12                                         
                           <--------------------------------------------------------------------------rJMFF036M12  
  29 ------------------------------------------------------->JMFF013P18                                               
                                       <---------------------------------------------------------------rJMFF013P18  
  32  ---------------------------------------------------------->JMFF027G03                                           
                      <-------------------------------------------------------------------------------rJMFF027G03  
  33 -------------------------------------->JMFF030A16                                                                
                     <--------------------------------------------------------------------------------rJMFF030A16  
  35  ----------------------------------------------------------->JMFF001F07                                          
                                <---------------------------------------------------------------------rJMFF001F07  
  47  ----------------------------------------------------------------------->JMFF042K08                              
                                   <-----------------------------------------------------------------rJMFF042K08  
  65   ------------------------------------------------------------------------>JMSF021B20                            
                 <----------------------------------------------------------------------------------rJMSF021B20  
  66 ------------------------------------------------------>JMFF024G16                                                
                <---------------------------------------------------------------------------------rJMFF024G16  
  69  ------------------------------------------------------------>JMFF006L22                                         
                <---------------------------------------------------------------------------------rJMFF006L22  
  72 ------------------------------------------------------------------------------------->JMSF043F16                 
                <---------------------------------------------------------------------------------rJMSF043F16  
  73 ---------------------------------------------------->JMFF033B07                                                  
                    <----------------------------------------------------------------------------rJMFF033B07  
  74 ------------------------------------------------------------------->JMSF021C04                                   
              <----------------------------------------------------------------------------------rJMSF021C04  
  76  ------------------------->JMSF018M01                                                                            
                  <-------------------------------------------------------------------------------rJMSF018M01  
  98 ------------------------------------------------------->JMFF022B12                                               
                <------------------------------------------------------------------------------rJMFF022B12  
 106  ------------------------------------------------------------>JMFF014J02                                         
                       <-----------------------------------------------------------------------rJMFF014J02  
 144   -------------------------------------------------------------->JMFF007D15                                      
                                                       <-----------------------------------rJMFF007D15

The following clones don't have the opposite end in this pair.

                                       <-----------------------------------------------------------------JMFN043C03-  
                                      <---------------------------------------------------------------rJMFF001B13-    
        ------------------------------------------------------------------>JMFN010K21-                                
     ----------------------------------------------------------->JMFF008B08-                                          
        ------------------------------------------------------------------>JMFN011P20-