clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004H20 | Sequence | 546 | 007286 (9) | gb|AIT42226.1| | 1e-17 | proteasome inhibitor-like protein [Solanum tuberosum] | 741 | 007286 (9) | ref|XP_009797393.1| | 3e-44 | PREDICTED: probable proteasome inhibitor [Nicotiana sylvestris] |
JMFF008C16 | Sequence | 579 | 007286 (9) | ref|XP_006340977.1| | 8e-26 | PREDICTED: probable proteasome inhibitor-like isoform X4 [Solanum tuberosum] | 738 | 007286 (9) | ref|XP_009587746.1| | 1e-43 | PREDICTED: probable proteasome inhibitor, partial [Nicotiana tomentosiformis] |
JMFN032B17 | Sequence | 622 | 007286 (9) | ref|XP_009797393.1| | 3e-69 | PREDICTED: probable proteasome inhibitor [Nicotiana sylvestris] | |||||
JMSF021K22 | Sequence | 669 | 007286 (9) | ref|XP_009797393.1| | 3e-72 | PREDICTED: probable proteasome inhibitor [Nicotiana sylvestris] | 771 | 007286 (9) | ref|XP_009587746.1| | 1e-42 | PREDICTED: probable proteasome inhibitor, partial [Nicotiana tomentosiformis] |
JMSF027B23 | Sequence | 574 | 007286 (9) | ref|XP_009797393.1| | 7e-70 | PREDICTED: probable proteasome inhibitor [Nicotiana sylvestris] | 767 | 007286 (9) | ref|XP_009587746.1| | 6e-42 | PREDICTED: probable proteasome inhibitor, partial [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007286============================================1478 35 ------------------------------------>JMFF004H20 <-------------------------------------------------rJMFF004H20 35 -------------------------------------->JMFF008C16 <-------------------------------------------------rJMFF008C16 287 -------------------------------------->JMSF027B23 <---------------------------------------------------rJMSF027B23 287 -------------------------------------------->JMSF021K22 <---------------------------------------------------rJMSF021K22
The following clones don't have the opposite end in this pair.
----------------------------------------->JMFN032B17-