List of clones in pair P011816.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016J01Sequence604007495 (15)dbj|BAA01974.1|2e-65chloroplast elongation factor TuA (EF-TuA) [Nicotiana sylvestris]774007495 (15)ref|XP_010102969.1|7e-127Elongation factor Tu [Morus notabilis] gb|EXB94487.1| Elongation factor Tu [Moru
JMFF018F08Sequence578007495 (15)dbj|BAA01974.1|5e-56chloroplast elongation factor TuA (EF-TuA) [Nicotiana sylvestris]727007495 (15)ref|XP_010102969.1|2e-117Elongation factor Tu [Morus notabilis] gb|EXB94487.1| Elongation factor Tu [Moru
JMFF022M19Sequence759007495 (15)ref|XP_010102969.1|5e-144Elongation factor Tu [Morus notabilis] gb|EXB94487.1| Elongation factor Tu [Moru
JMFF025M03Sequence479007495 (15)dbj|BAA01974.1|3e-33chloroplast elongation factor TuA (EF-TuA) [Nicotiana sylvestris]773007495 (15)ref|XP_010102969.1|1e-131Elongation factor Tu [Morus notabilis] gb|EXB94487.1| Elongation factor Tu [Moru
JMFF041L14Sequence655007495 (15)dbj|BAA01974.1|4e-78chloroplast elongation factor TuA (EF-TuA) [Nicotiana sylvestris]554007495 (15)ref|XP_008379193.1|2e-53PREDICTED: elongation factor TuA, chloroplastic-like [Malus domestica]
JMFF050M24Sequence598007495 (15)dbj|BAA01974.1|3e-63chloroplast elongation factor TuA (EF-TuA) [Nicotiana sylvestris]561007495 (15)emb|CDX98668.1|3e-88BnaA03g44530D [Brassica napus]
JMFN029K12Sequence505007495 (15)gb|AFK35632.1|2e-68unknown [Lotus japonicus]
JMFS147C03Sequence620007495 (15)dbj|BAA01974.1|4e-92chloroplast elongation factor TuA (EF-TuA) [Nicotiana sylvestris]
JMSF022D19Sequence641007495 (15)ref|XP_010529344.1|4e-90PREDICTED: elongation factor Tu, chloroplastic-like [Tarenaya hassleriana]769007495 (15)ref|XP_010529344.1|4e-159PREDICTED: elongation factor Tu, chloroplastic-like [Tarenaya hassleriana]

Contig 7495 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007495============================================1811         
   5 ----------------------------------->JMFF041L14                                                                   
                                                                          <------------------------------rJMFF041L14  
 110 ------------------------------->JMFF018F08                                                                       
                                                           <---------------------------------------rJMFF018F08  
 110 -------------------------------->JMFF016J01                                                                      
                                                         <-----------------------------------------rJMFF016J01  
 115 ------------------------->JMFF025M03                                                                             
                                                         <-----------------------------------------rJMFF025M03  
 138 -------------------------------->JMFF050M24                                                                      
                                                                  <------------------------------rJMFF050M24  
 883                                     ---------------------------------->JMSF022D19                                
                                                 <------------------------------------------rJMSF022D19  

The following clones don't have the opposite end in this pair.

                                                      <-----------------------------------------rJMFF022M19-          
          --------------------------------->JMFS147C03-                                                               
                                                                       --------------------------->JMFN029K12-