List of clones in pair P011778.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009J07Sequence499004686 (43)ref|XP_009795442.1|2e-58PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]630004686 (43)ref|XP_004239210.1|7e-53PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF015J13Sequence548004686 (43)ref|XP_004239210.1|4e-36PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]513004686 (43)ref|XP_004239210.1|1e-35PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF021D21Sequence550004686 (43)ref|XP_009795442.1|1e-66PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]711004686 (43)ref|XP_004239210.1|7e-49PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF024N04Sequence538004686 (43)ref|XP_009795442.1|7e-67PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]747004686 (43)ref|XP_004239210.1|2e-67PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF025O05Sequence622004686 (43)ref|XP_009795442.1|5e-80PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]
JMFF027E13Sequence506004686 (43)ref|XP_009795442.1|2e-60PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]709004686 (43)ref|XP_004239210.1|8e-59PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF030E11Sequence545004686 (43)ref|XP_009795442.1|6e-69PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]706004686 (43)ref|XP_004239210.1|5e-58PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF034I01Sequence609004686 (43)ref|XP_009795442.1|5e-78PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]696004686 (43)ref|XP_004239210.1|7e-56PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF041K03Sequence576004686 (43)ref|XP_009795442.1|6e-76PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]537004686 (43)ref|XP_004239210.1|7e-23PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF044C16Sequence618004686 (43)ref|XP_009795442.1|2e-83PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]582004686 (43)ref|XP_004239210.1|1e-29PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF049N12Sequence618004686 (43)ref|XP_009795442.1|5e-79PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]522004686 (43)ref|XP_004239210.1|9e-36PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFF051D07Sequence606004686 (43)ref|XP_009795442.1|2e-78PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]
JMFF051O05Sequence616004686 (43)ref|XP_009795442.1|1e-78PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]558004686 (43)ref|XP_004239210.1|3e-36PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFN006H21Sequence627004686 (43)ref|XP_009795442.1|5e-80PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]
JMFN011H12Sequence620004686 (43)ref|XP_004239210.1|1e-55PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFN018F18Sequence624004686 (43)ref|XP_009795442.1|6e-84PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]
JMFN038J06Sequence597004686 (43)ref|XP_004239210.1|1e-38PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMFS033C09Sequence604004686 (43)ref|XP_004239210.1|2e-94PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMSF002M05Sequence377004686 (43)ref|XP_009607577.1|6e-40PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana tomentosiformis]725004686 (43)ref|XP_004239210.1|2e-64PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMSF012C17Sequence456004686 (43)ref|XP_009795442.1|2e-51PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]735004686 (43)ref|XP_004239210.1|2e-68PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMSF019B10Sequence733004686 (43)ref|XP_004239210.1|2e-67PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMSF024N16Sequence667004686 (43)ref|XP_009795442.1|7e-89PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]735004686 (43)ref|XP_004239210.1|2e-68PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMSF028P08Sequence629004686 (43)ref|XP_009795442.1|4e-81PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]725004686 (43)ref|XP_004239210.1|2e-65PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]
JMSF029P08Sequence580004686 (43)ref|XP_009795442.1|9e-49PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]
JMSF038A06Sequence630004686 (43)ref|XP_009795442.1|4e-80PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]869004686 (43)ref|XP_009795442.1|1e-86PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]
JMSF044P18Sequence716004686 (43)ref|XP_009795442.1|9e-89PREDICTED: REF/SRPP-like protein At1g67360 [Nicotiana sylvestris]615004686 (43)ref|XP_004239210.1|4e-52PREDICTED: REF/SRPP-like protein At1g67360 [Solanum lycopersicum]

Contig 4686 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004686============================================1003         
  22   ------------------------------------------------------------->JMFF044C16                                       
                                               <---------------------------------------------------------rJMFF044C16  
  30 ----------------------------------------------------->JMFF021D21                                                 
                                <----------------------------------------------------------------------rJMFF021D21  
  45     -------------------------------------------------------->JMFF041K03                                          
                                                   <-----------------------------------------------------rJMFF041K03  
  93 ------------------------------------------------------------>JMFF051O05                                          
                                           <----------------------------------------------------rJMFF051O05  
 101 ------------------------------------------------------------->JMFF049N12                                         
                                           <---------------------------------------------------rJMFF049N12  
 120  ------------------------------------------------->JMFF009J07                                                    
                               <--------------------------------------------------------------rJMFF009J07  
 130 ------------------------------------------------->JMFF027E13                                                     
                      <----------------------------------------------------------------------rJMFF027E13  
 130 ----------------------------------------------------->JMFF030E11                                                 
                      <---------------------------------------------------------------------rJMFF030E11  
 134  ----------------------------------------------------->JMFF024N04                                                
                  <-------------------------------------------------------------------------rJMFF024N04  
 134  ------------------------------------------------------------>JMFF034I01                                         
                       <--------------------------------------------------------------------rJMFF034I01  
 142 ------------------------------------>JMSF002M05                                                                  
                   <-----------------------------------------------------------------------rJMSF002M05  
 144 -------------------------------------------->JMSF012C17                                                          
                  <------------------------------------------------------------------------rJMSF012C17  
 145 ------------------------------------------------------------->JMSF028P08                                         
                   <-----------------------------------------------------------------------rJMSF028P08  
 146  ----------------------------------------------------------------->JMSF024N16                                    
                  <------------------------------------------------------------------------rJMSF024N16  
 150 -------------------------------------------------------------->JMSF038A06                                        
      <-----------------------------------------------------------------------------------rJMSF038A06  
 155 ---------------------------------------------------------------------->JMSF044P18                                
                               <----------------------------------------------------------rJMSF044P18  
 490                                      ---------------------------------------------------->JMFF015J13             
                                          <--------------------------------------------------rJMFF015J13

The following clones don't have the opposite end in this pair.

                                        ----------------------------------------------------------->JMFN038J06-       
     ----------------------------------------------------------->JMFF051D07-                                          
     ------------------------------------------------------------->JMFF025O05-                                        
                  <------------------------------------------------------------------------rJMSF019B10-               
                       ------------------------------------------------------------->JMFN011H12-                      
            -------------------------------------------------------------->JMFN006H21-                                
       ----------------------------------------------------------->JMFS033C09-                                        
                           <-------------------------------------------------------rJMSF029P08-                       
       ------------------------------------------------------------->JMFN018F18-