clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004P19 | Sequence | 381 | 001627 (37) | ref|XP_009629758.1| | 218 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 590 | 001627 (37) | ref|XP_010524305.1| | 3e-85 | PREDICTED: ADP-ribosylation factor-like [Tarenaya hassleriana] |
JMFF006G13 | Sequence | 484 | 001627 (37) | ref|XP_009629758.1| | 265 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 646 | 001627 (37) | ref|XP_009393904.1| | 6e-97 | PREDICTED: ADP-ribosylation factor 1-like [Musa acuminata subsp. malaccensis] r |
JMFF011H18 | Sequence | 566 | 001627 (37) | ref|XP_009629758.1| | 327 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 718 | 001627 (37) | gb|KDO66124.1| | 2e-114 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] |
JMFF014M23 | Sequence | 569 | 001627 (37) | ref|XP_009629758.1| | 324 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 774 | 001627 (37) | ref|XP_009629758.1| | 369 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] |
JMFF018D09 | Sequence | 521 | 001627 (37) | ref|XP_009629758.1| | 296 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 758 | 001627 (37) | gb|KDO66124.1| | 1e-79 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] |
JMFF018O02 | Sequence | 585 | 001627 (37) | ref|XP_009629758.1| | 343 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 760 | 001627 (37) | ref|XP_009629758.1| | 363 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] |
JMFF019H17 | Sequence | 585 | 001627 (37) | ref|XP_009629758.1| | 345 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 739 | 001627 (37) | gb|KDO66124.1| | 3e-117 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] |
JMFF020M08 | Sequence | 521 | 001627 (37) | ref|XP_009629758.1| | 296 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 755 | 001627 (37) | ref|XP_009629758.1| | 367 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] |
JMFF027C07 | Sequence | 596 | 001627 (37) | ref|XP_009629758.1| | 349 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 710 | 001627 (37) | gb|KDO66124.1| | 8e-117 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] |
JMFF033E21 | Sequence | 572 | 001627 (37) | ref|XP_009629758.1| | 306 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 712 | 001627 (37) | gb|KDO66124.1| | 8e-117 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] |
JMFF041A01 | Sequence | 658 | 001627 (37) | ref|XP_009629758.1| | 375 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 574 | 001627 (37) | emb|CDX83340.1| | 1e-65 | BnaA03g21660D [Brassica napus] |
JMFF041H03 | Sequence | 659 | 001627 (37) | ref|XP_009629758.1| | 387 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 629 | 001627 (37) | gb|KDO66124.1| | 6e-86 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] |
JMFF042B12 | Sequence | 652 | 001627 (37) | ref|XP_009629758.1| | 366 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
JMFF046A16 | Sequence | 619 | 001627 (37) | ref|XP_009629758.1| | 350 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 494 | 001627 (37) | dbj|BAH57273.1| | 6e-21 | AT3G62290 [Arabidopsis thaliana] |
JMFN016F13 | Sequence | 620 | 001627 (37) | gb|KDO66124.1| | 1e-106 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] | |||||
JMFN029F11 | Sequence | 611 | 001627 (37) | ref|XP_009629758.1| | 372 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
JMFN030D16 | Sequence | 610 | 001627 (37) | gb|KDO66124.1| | 1e-74 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] | |||||
JMFN032J12 | Sequence | 608 | 001627 (37) | ref|XP_010092942.1| | 7e-82 | ADP-ribosylation factor 2 [Morus notabilis] gb|EXB52995.1| ADP-ribosylation fact | |||||
JMFN038L01 | Sequence | 627 | 001627 (37) | ref|XP_009629758.1| | 383 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
JMFS126E04 | Sequence | 575 | 001627 (37) | ref|XP_009629758.1| | 364 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
JMSF021K23 | Sequence | 691 | 001627 (37) | ref|XP_009629758.1| | 371 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 765 | 001627 (37) | gb|KDO66124.1| | 4e-114 | hypothetical protein CISIN_1g029675mg [Citrus sinensis] |
JMSF038L01 | Sequence | 652 | 001627 (37) | ref|XP_009629758.1| | 384 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 831 | 001627 (37) | ref|XP_009629758.1| | 371 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001627============================================1038 7 ------------------------------------------------->JMFF018D09 <------------------------------------------------------------------------rJMFF018D09 92 ----------------------------------------------------------->JMFF046A16 <------------------------------------------rJMFF046A16 144 ------------------------------------------------------------------>JMSF021K23 <------------------------------------------------------------------------rJMSF021K23 146 -------------------------------------------------------------->JMFF041A01 <------------------------------------------------------rJMFF041A01 157 --------------------------------------------------------------->JMFF041H03 <------------------------------------------------------------rJMFF041H03 173 ------------------------------------------------------->JMFF019H17 <----------------------------------------------------------------------rJMFF019H17 190 ------------------------------------------------------>JMFF011H18 <-------------------------------------------------------------------rJMFF011H18 190 ------------------------------------------------------->JMFF018O02 <------------------------------------------------------------------------rJMFF018O02 192 --------------------------------------------->JMFF006G13 <-------------------------------------------------------------rJMFF006G13 198 ------------------------------------------------------>JMFF033E21 <--------------------------------------------------------------------rJMFF033E21 199 ------------------------------------------------->JMFF020M08 <------------------------------------------------------------------------rJMFF020M08 199 --------------------------------------------------------->JMFF027C07 <-------------------------------------------------------------------rJMFF027C07 207 ------------------------------------------------------>JMFF014M23 <-------------------------------------------------------------------------rJMFF014M23 224 ------------------------------------>JMFF004P19 <--------------------------------------------------------rJMFF004P19 224 -------------------------------------------------------------->JMSF038L01 <-----------------------------------------------------------------------------rJMSF038L01
The following clones don't have the opposite end in this pair.
---------------------------------------------------------->JMFN038L01- ---------------------------------------------------------->JMFN032J12- --------------------------------------------------------->JMFN030D16- ---------------------------------------------------------->JMFN029F11- ------------------------------------------------------>JMFS126E04- ------------------------------------------------------------>JMFF042B12- ----------------------------------------------------------->JMFN016F13-