List of clones in pair P011744.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P19Sequence381001627 (37)ref|XP_009629758.1|218PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]590001627 (37)ref|XP_010524305.1|3e-85PREDICTED: ADP-ribosylation factor-like [Tarenaya hassleriana]
JMFF006G13Sequence484001627 (37)ref|XP_009629758.1|265PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]646001627 (37)ref|XP_009393904.1|6e-97PREDICTED: ADP-ribosylation factor 1-like [Musa acuminata subsp. malaccensis] r
JMFF011H18Sequence566001627 (37)ref|XP_009629758.1|327PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]718001627 (37)gb|KDO66124.1|2e-114hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFF014M23Sequence569001627 (37)ref|XP_009629758.1|324PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]774001627 (37)ref|XP_009629758.1|369PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
JMFF018D09Sequence521001627 (37)ref|XP_009629758.1|296PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]758001627 (37)gb|KDO66124.1|1e-79hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFF018O02Sequence585001627 (37)ref|XP_009629758.1|343PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]760001627 (37)ref|XP_009629758.1|363PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
JMFF019H17Sequence585001627 (37)ref|XP_009629758.1|345PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]739001627 (37)gb|KDO66124.1|3e-117hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFF020M08Sequence521001627 (37)ref|XP_009629758.1|296PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]755001627 (37)ref|XP_009629758.1|367PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
JMFF027C07Sequence596001627 (37)ref|XP_009629758.1|349PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]710001627 (37)gb|KDO66124.1|8e-117hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFF033E21Sequence572001627 (37)ref|XP_009629758.1|306PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]712001627 (37)gb|KDO66124.1|8e-117hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFF041A01Sequence658001627 (37)ref|XP_009629758.1|375PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]574001627 (37)emb|CDX83340.1|1e-65BnaA03g21660D [Brassica napus]
JMFF041H03Sequence659001627 (37)ref|XP_009629758.1|387PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]629001627 (37)gb|KDO66124.1|6e-86hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFF042B12Sequence652001627 (37)ref|XP_009629758.1|366PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
JMFF046A16Sequence619001627 (37)ref|XP_009629758.1|350PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]494001627 (37)dbj|BAH57273.1|6e-21AT3G62290 [Arabidopsis thaliana]
JMFN016F13Sequence620001627 (37)gb|KDO66124.1|1e-106hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFN029F11Sequence611001627 (37)ref|XP_009629758.1|372PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
JMFN030D16Sequence610001627 (37)gb|KDO66124.1|1e-74hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMFN032J12Sequence608001627 (37)ref|XP_010092942.1|7e-82ADP-ribosylation factor 2 [Morus notabilis] gb|EXB52995.1| ADP-ribosylation fact
JMFN038L01Sequence627001627 (37)ref|XP_009629758.1|383PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
JMFS126E04Sequence575001627 (37)ref|XP_009629758.1|364PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
JMSF021K23Sequence691001627 (37)ref|XP_009629758.1|371PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]765001627 (37)gb|KDO66124.1|4e-114hypothetical protein CISIN_1g029675mg [Citrus sinensis]
JMSF038L01Sequence652001627 (37)ref|XP_009629758.1|384PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]831001627 (37)ref|XP_009629758.1|371PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]

Contig 1627 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001627============================================1038         
   7  ------------------------------------------------->JMFF018D09                                                    
                                <------------------------------------------------------------------------rJMFF018D09  
  92  ----------------------------------------------------------->JMFF046A16                                          
                                                      <------------------------------------------rJMFF046A16  
 144  ------------------------------------------------------------------>JMSF021K23                                   
                   <------------------------------------------------------------------------rJMSF021K23  
 146  -------------------------------------------------------------->JMFF041A01                                       
                                     <------------------------------------------------------rJMFF041A01  
 157  --------------------------------------------------------------->JMFF041H03                                      
                              <------------------------------------------------------------rJMFF041H03  
 173  ------------------------------------------------------->JMFF019H17                                              
                  <----------------------------------------------------------------------rJMFF019H17  
 190  ------------------------------------------------------>JMFF011H18                                               
                   <-------------------------------------------------------------------rJMFF011H18  
 190  ------------------------------------------------------->JMFF018O02                                              
              <------------------------------------------------------------------------rJMFF018O02  
 192  --------------------------------------------->JMFF006G13                                                        
                         <-------------------------------------------------------------rJMFF006G13  
 198  ------------------------------------------------------>JMFF033E21                                               
                  <--------------------------------------------------------------------rJMFF033E21  
 199  ------------------------------------------------->JMFF020M08                                                    
              <------------------------------------------------------------------------rJMFF020M08  
 199  --------------------------------------------------------->JMFF027C07                                            
                  <-------------------------------------------------------------------rJMFF027C07  
 207 ------------------------------------------------------>JMFF014M23                                                
           <-------------------------------------------------------------------------rJMFF014M23  
 224     ------------------------------------>JMFF004P19                                                              
                              <--------------------------------------------------------rJMFF004P19  
 224  -------------------------------------------------------------->JMSF038L01                                       
      <-----------------------------------------------------------------------------rJMSF038L01  

The following clones don't have the opposite end in this pair.

        ---------------------------------------------------------->JMFN038L01-                                        
                               ---------------------------------------------------------->JMFN032J12-                 
                                  --------------------------------------------------------->JMFN030D16-               
       ---------------------------------------------------------->JMFN029F11-                                         
          ------------------------------------------------------>JMFS126E04-                                          
      ------------------------------------------------------------>JMFF042B12-                                        
                      ----------------------------------------------------------->JMFN016F13-