List of clones in pair P011708.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016F16Sequence557004575 (17)ref|XP_011075483.1|4e-112PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED697004575 (17)ref|XP_011075483.1|1e-85PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFF021P10Sequence434004575 (17)ref|XP_011075483.1|1e-79PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED559004575 (17)gb|EYU34659.1|4e-54hypothetical protein MIMGU_mgv1a014209mg [Erythranthe guttata]
JMFF029H05Sequence412004575 (17)ref|XP_011075483.1|1e-73PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED721004575 (17)ref|XP_011075483.1|3e-101PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFN011J12Sequence517004575 (17)ref|XP_011075483.1|2e-104PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFN015E21Sequence480004575 (17)ref|XP_011075483.1|2e-96PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFN041H18Sequence578004575 (17)ref|XP_011075483.1|2e-116PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFS119F02Sequence610004575 (17)ref|XP_011075483.1|7e-128PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMSF010B08Sequence228004575 (17)ref|NP_001274868.1|2e-3040S ribosomal protein S9-2-like [Solanum tuberosum] gb|AFW90596.1| putative 40S 779004575 (17)ref|XP_011075483.1|6e-124PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMSF023N08Sequence634004575 (17)ref|XP_011075483.1|2e-120PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED789004575 (17)ref|XP_011075483.1|2e-111PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMSF044D02Sequence457004575 (17)ref|XP_011075483.1|3e-87PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED803004575 (17)ref|XP_011075483.1|6e-118PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED

Contig 4575 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004575============================================ 893         
   4 ----------------------------------------------->JMFF021P10                                                       
                                           <--------------------------------------------------------------rJMFF021P10  
   8 -------------------------------------------------->JMSF044D02                                                    
               <-----------------------------------------------------------------------------------------rJMSF044D02  
   8 ---------------------------------------------------------------------->JMSF023N08                                
                 <--------------------------------------------------------------------------------------rJMSF023N08  
  24 --------------------------------------------->JMFF029H05                                                         
                      <--------------------------------------------------------------------------------rJMFF029H05  
 143 ------------------------>JMSF010B08                                                                              
        <---------------------------------------------------------------------------------rJMSF010B08  
 236  ------------------------------------------------------------->JMFF016F16                                        
                            <--------------------------------------------------rJMFF016F16

The following clones don't have the opposite end in this pair.

                            <------------------------------------------------------------rJMSF044B03*                 
      --------------------------------------------------------->JMFN011J12-                                           
      ------------------------------------------------------------------->JMFS119F02-                                 
                      ----------------------------------------------------->JMFN015E21-                               
              ------------------------------------------------------>JMFN041H18-