clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005D20 | Sequence | 472 | 007826 (13) | emb|CDO96991.1| | 3e-51 | unnamed protein product [Coffea canephora] | |||||
JMFF022B08 | Sequence | 702 | 007826 (13) | gb|KJB79066.1| | 2e-122 | hypothetical protein B456_013G032400 [Gossypium raimondii] | |||||
JMFN045L11 | Sequence | 628 | 007826 (13) | ref|XP_011092846.1| | 2e-91 | PREDICTED: fructose-bisphosphate aldolase 1, chloroplastic [Sesamum indicum] | |||||
JMSF013O18 | Sequence | 270 | 007826 (13) | ref|XP_011092846.1| | 6e-27 | PREDICTED: fructose-bisphosphate aldolase 1, chloroplastic [Sesamum indicum] | 711 | 007826 (13) | gb|KJB79066.1| | 2e-122 | hypothetical protein B456_013G032400 [Gossypium raimondii] |
JMSF017M02 | Sequence | 263 | 007826 (13) | 737 | 007826 (13) | gb|KHG27315.1| | 8e-116 | putative fructose-bisphosphate aldolase 1, chloroplastic -like protein [Gossypi | |||
JMSF043M14 | Sequence | 769 | 007826 (13) | emb|CDO96991.1| | 6e-143 | unnamed protein product [Coffea canephora] | 718 | 007826 (13) | gb|KJB79066.1| | 4e-133 | hypothetical protein B456_013G032400 [Gossypium raimondii] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007826============================================1525 2 ---------------->JMSF017M02 <-----------------------------------------------rJMSF017M02 162 ------------------------------------------------->JMSF043M14 <---------------------------------------------rJMSF043M14 195 ----------------->JMSF013O18 <---------------------------------------------rJMSF013O18
The following clones don't have the opposite end in this pair.
------------------------------>JMFF005D20- ----------------------------------------->JMSF027M21# ---------------->JMSF015I08# <---------------------------------------------rJMFF022B08- <----------------------------------------------------rJMFF018I18* ------------------------------------->JMFF050F16# ---------------------------------------->JMFN045L11-