List of clones in pair P011636.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017P08Sequence560000636 (29)ref|XP_004917040.1|2e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]671000636 (29)ref|XP_004917040.1|8e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMFN006B18Sequence626000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMFN006P14Sequence592000636 (29)ref|XP_003621457.1|9e-56Histone H3 [Medicago truncatula] gb|AES77675.1| core histone H2A/H2B/H3/H4 [Medi
JMFN034P10Sequence595000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF010A20Sequence281000636 (29)ref|XP_004917040.1|3e-43PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]651000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF015K06Sequence566000636 (29)ref|XP_004917040.1|1e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]651000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF018P14Sequence473000636 (29)ref|XP_004917040.1|4e-78PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]651000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF019A01Sequence516000636 (29)ref|XP_004917040.1|7e-78PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]651000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF023F02Sequence695000636 (29)ref|XP_004917040.1|1e-76PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]680000636 (29)ref|XP_004917040.1|8e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF027D22Sequence616000636 (29)ref|XP_004917040.1|3e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]650000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF035B15Sequence688000636 (29)ref|XP_004917040.1|6e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]650000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF036E18Sequence669000636 (29)ref|XP_004917040.1|5e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]643000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF048O17Sequence612000636 (29)ref|XP_004917040.1|2e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]650000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF052O18Sequence673000636 (29)ref|XP_004917040.1|5e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]651000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]
JMSF053O23Sequence584000636 (29)ref|XP_004917040.1|2e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]651000636 (29)ref|XP_004917040.1|4e-77PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis]

Contig 636 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000636============================================ 699         
  33  ------------------------------------------------------------------------------->JMFF017P08                      
       <---------------------------------------------------------------------------------------------rJMFF017P08  
  47 --------------------------------------->JMSF010A20                                                               
     <--------------------------------------------------------------------------------------------rJMSF010A20  
  47 ------------------------------------------------------------------>JMSF018P14                                    
     <--------------------------------------------------------------------------------------------rJMSF018P14  
  47 ------------------------------------------------------------------>JMSF035B15                                    
     <--------------------------------------------------------------------------------------------rJMSF035B15  
  47 ------------------------------------------------------------------------->JMSF019A01                             
     <--------------------------------------------------------------------------------------------rJMSF019A01  
  47 -------------------------------------------------------------------------------->JMSF015K06                      
     <--------------------------------------------------------------------------------------------rJMSF015K06  
  47 --------------------------------------------------------------------------------------->JMSF027D22               
     <--------------------------------------------------------------------------------------------rJMSF027D22  
  47 --------------------------------------------------------------------------------------->JMSF048O17               
     <--------------------------------------------------------------------------------------------rJMSF048O17  
  48 ---------------------------------------------------------------------------------->JMSF053O23                    
     <--------------------------------------------------------------------------------------------rJMSF053O23  
  55 ----------------------------------------------------------------------------------------------->JMSF036E18       
     <-------------------------------------------------------------------------------------------rJMSF036E18  
  58 ------------------------------------------------------------------------------------------------>JMSF052O18      
     <-------------------------------------------------------------------------------------------rJMSF052O18  
 231  --------------------------------------------------------------------------------------------------->JMSF023F02   
      <------------------------------------------------------------------rJMSF023F02  

The following clones don't have the opposite end in this pair.

        ------------------------------------------------------------------------------------>JMFN034P10-              
       ------------------------------------------------------------------------------------>JMFN006P14-               
                                                      <------------------------------------------rJMSF006N13*         
      ---------------------------->JMSF006P15*                                                                        
         ----------------------------------------------------------------------------------------->JMFN006B18-