clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017P08 | Sequence | 560 | 000636 (29) | ref|XP_004917040.1| | 2e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 671 | 000636 (29) | ref|XP_004917040.1| | 8e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMFN006B18 | Sequence | 626 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | |||||
JMFN006P14 | Sequence | 592 | 000636 (29) | ref|XP_003621457.1| | 9e-56 | Histone H3 [Medicago truncatula] gb|AES77675.1| core histone H2A/H2B/H3/H4 [Medi | |||||
JMFN034P10 | Sequence | 595 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | |||||
JMSF010A20 | Sequence | 281 | 000636 (29) | ref|XP_004917040.1| | 3e-43 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 651 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF015K06 | Sequence | 566 | 000636 (29) | ref|XP_004917040.1| | 1e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 651 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF018P14 | Sequence | 473 | 000636 (29) | ref|XP_004917040.1| | 4e-78 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 651 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF019A01 | Sequence | 516 | 000636 (29) | ref|XP_004917040.1| | 7e-78 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 651 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF023F02 | Sequence | 695 | 000636 (29) | ref|XP_004917040.1| | 1e-76 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 680 | 000636 (29) | ref|XP_004917040.1| | 8e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF027D22 | Sequence | 616 | 000636 (29) | ref|XP_004917040.1| | 3e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 650 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF035B15 | Sequence | 688 | 000636 (29) | ref|XP_004917040.1| | 6e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 650 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF036E18 | Sequence | 669 | 000636 (29) | ref|XP_004917040.1| | 5e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 643 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF048O17 | Sequence | 612 | 000636 (29) | ref|XP_004917040.1| | 2e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 650 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF052O18 | Sequence | 673 | 000636 (29) | ref|XP_004917040.1| | 5e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 651 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
JMSF053O23 | Sequence | 584 | 000636 (29) | ref|XP_004917040.1| | 2e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] | 651 | 000636 (29) | ref|XP_004917040.1| | 4e-77 | PREDICTED: histone H3.2-like isoform X2 [Xenopus (Silurana) tropicalis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000636============================================ 699 33 ------------------------------------------------------------------------------->JMFF017P08 <---------------------------------------------------------------------------------------------rJMFF017P08 47 --------------------------------------->JMSF010A20 <--------------------------------------------------------------------------------------------rJMSF010A20 47 ------------------------------------------------------------------>JMSF018P14 <--------------------------------------------------------------------------------------------rJMSF018P14 47 ------------------------------------------------------------------>JMSF035B15 <--------------------------------------------------------------------------------------------rJMSF035B15 47 ------------------------------------------------------------------------->JMSF019A01 <--------------------------------------------------------------------------------------------rJMSF019A01 47 -------------------------------------------------------------------------------->JMSF015K06 <--------------------------------------------------------------------------------------------rJMSF015K06 47 --------------------------------------------------------------------------------------->JMSF027D22 <--------------------------------------------------------------------------------------------rJMSF027D22 47 --------------------------------------------------------------------------------------->JMSF048O17 <--------------------------------------------------------------------------------------------rJMSF048O17 48 ---------------------------------------------------------------------------------->JMSF053O23 <--------------------------------------------------------------------------------------------rJMSF053O23 55 ----------------------------------------------------------------------------------------------->JMSF036E18 <-------------------------------------------------------------------------------------------rJMSF036E18 58 ------------------------------------------------------------------------------------------------>JMSF052O18 <-------------------------------------------------------------------------------------------rJMSF052O18 231 --------------------------------------------------------------------------------------------------->JMSF023F02 <------------------------------------------------------------------rJMSF023F02
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------>JMFN034P10- ------------------------------------------------------------------------------------>JMFN006P14- <------------------------------------------rJMSF006N13* ---------------------------->JMSF006P15* ----------------------------------------------------------------------------------------->JMFN006B18-