clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009A22 | Sequence | 597 | 002149 (15) | ref|XP_006435990.1| | 2e-109 | hypothetical protein CICLE_v10032183mg [Citrus clementina] ref|XP_006486099.1| P | 729 | 002149 (15) | gb|ABR25654.1| | 8e-37 | synaptic glycoprotein sc2 [Oryza sativa Indica Group] |
JMFN043K14 | Sequence | 611 | 002149 (15) | ref|XP_002530850.1| | 1e-126 | Synaptic glycoprotein SC2, putative [Ricinus communis] gb|EEF31524.1| Synaptic g | |||||
JMFS148B09 | Sequence | 623 | 002149 (15) | ref|XP_011091470.1| | 2e-118 | PREDICTED: very-long-chain enoyl-CoA reductase [Sesamum indicum] | |||||
JMSF013B07 | Sequence | 460 | 002149 (15) | ref|XP_002530850.1| | 2e-52 | Synaptic glycoprotein SC2, putative [Ricinus communis] gb|EEF31524.1| Synaptic g | 791 | 002149 (15) | gb|ABR25654.1| | 2e-64 | synaptic glycoprotein sc2 [Oryza sativa Indica Group] |
JMSF024G03 | Sequence | 714 | 002149 (15) | ref|XP_006435990.1| | 3e-112 | hypothetical protein CICLE_v10032183mg [Citrus clementina] ref|XP_006486099.1| P | 694 | 002149 (15) | gb|ABR25654.1| | 7e-51 | synaptic glycoprotein sc2 [Oryza sativa Indica Group] |
JMSF039C23 | Sequence | 680 | 002149 (15) | ref|XP_006435990.1| | 1e-105 | hypothetical protein CICLE_v10032183mg [Citrus clementina] ref|XP_006486099.1| P | 852 | 002149 (15) | ref|XP_010321379.1| | 4e-82 | PREDICTED: very-long-chain enoyl-CoA reductase [Solanum lycopersicum] ref|XP_010 |
JMSF040K23 | Sequence | 632 | 002149 (15) | ref|XP_011091470.1| | 1e-126 | PREDICTED: very-long-chain enoyl-CoA reductase [Sesamum indicum] | 823 | 002149 (15) | ref|XP_010321379.1| | 3e-81 | PREDICTED: very-long-chain enoyl-CoA reductase [Solanum lycopersicum] ref|XP_010 |
JMSF047O04 | Sequence | 668 | 002149 (15) | ref|XP_011091470.1| | 3e-136 | PREDICTED: very-long-chain enoyl-CoA reductase [Sesamum indicum] | 747 | 002149 (15) | ref|XP_010321379.1| | 2e-108 | PREDICTED: very-long-chain enoyl-CoA reductase [Solanum lycopersicum] ref|XP_010 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002149============================================1545 19 ------------------------------------------->JMSF039C23 <-----------------------------------------------------rJMSF039C23 32 --------------------------------------------->JMSF024G03 <--------------------------------------------rJMSF024G03 40 ----------------------------->JMSF013B07 <--------------------------------------------------rJMSF013B07 103 -------------------------------------->JMFF009A22 <------------------------------------------rJMFF009A22 169 ---------------------------------------->JMSF040K23 <----------------------------------------------------rJMSF040K23 355 ------------------------------------------>JMSF047O04 <-----------------------------------------------rJMSF047O04
The following clones don't have the opposite end in this pair.
<-------------------------------rJMSF024F03* --------------------------------------->JMFN043K14- --------------------------------------->JMFS148B09-