List of clones in pair P011529.

clone	seq.	5'-sequence					3'-sequence
clone	seq.	length	contig	BestHit	Evalue	description	length	contig	BestHit	Evalue	description
JMFF007G20	Sequence	517	009541 (28)	ref\|XP_006384170.1\|	3e-57	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	661	009541 (28)	ref\|XP_006384170.1\|	7e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMFF008K09	Sequence	526	009541 (28)	ref\|XP_006384170.1\|	2e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	663	009541 (28)	ref\|XP_006384170.1\|	1e-57	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMFF022N07	Sequence	431	009541 (28)	gb\|KDP44206.1\|	2e-35	hypothetical protein JCGZ_05673 [Jatropha curcas]	662	009541 (28)	ref\|XP_006384170.1\|	7e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMFF033G19	Sequence	528	009541 (28)	ref\|XP_006384170.1\|	2e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	665	009541 (28)	ref\|XP_010553294.1\|	8e-58	PREDICTED: probable histone H2B.3 [Tarenaya hassleriana]
JMFF036H08	Sequence	526	009541 (28)	ref\|XP_006384170.1\|	2e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	653	009541 (28)	ref\|XP_006384170.1\|	7e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMFN010I24	Sequence	640	009541 (28)	ref\|XP_006384170.1\|	8e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMSF017I24	Sequence	374	009541 (28)	ref\|NP_180440.1\|	2e-20	histone H2B [Arabidopsis thaliana] sp\|Q9SI96.3\|H2B3_ARATH RecName: Full=Histone	654	009541 (28)	ref\|XP_006384170.1\|	7e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMSF019L08	Sequence						651	009541 (28)	ref\|XP_010553294.1\|	7e-58	PREDICTED: probable histone H2B.3 [Tarenaya hassleriana]
JMSF019M08	Sequence	487	009541 (28)	ref\|XP_006384170.1\|	1e-50	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	653	009541 (28)	ref\|XP_010553294.1\|	7e-58	PREDICTED: probable histone H2B.3 [Tarenaya hassleriana]
JMSF022N03	Sequence	677	009541 (28)	ref\|XP_006384170.1\|	9e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	651	009541 (28)	ref\|XP_006384170.1\|	6e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMSF037L11	Sequence	627	009541 (28)	ref\|XP_006384170.1\|	5e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	570	009541 (28)	ref\|XP_006384170.1\|	3e-58	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMSF041P02	Sequence	693	009541 (28)	ref\|XP_006384170.1\|	2e-57	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	640	009541 (28)	ref\|XP_006384170.1\|	1e-57	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|
JMSF046P16	Sequence	696	009541 (28)	ref\|XP_006384170.1\|	1e-57	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	588	009541 (28)	ref\|XP_010553294.1\|	3e-58	PREDICTED: probable histone H2B.3 [Tarenaya hassleriana]
JMSF047H07	Sequence	685	009541 (28)	ref\|XP_006384170.1\|	1e-57	hypothetical protein POPTR_0004s09030g [Populus trichocarpa] ref\|XP_011002796.1\|	179	009541 (28)

Contig 9541 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.

SCORE============================================Contig009541============================================ 696         
  34 ------------------------------------------------------------->JMFF022N07                                         
     <----------------------------------------------------------------------------------------------rJMFF022N07  
  34 --------------------------------------------------------------------------->JMFF008K09                           
      <---------------------------------------------------------------------------------------------rJMFF008K09  
  34 --------------------------------------------------------------------------->JMFF033G19                           
     <----------------------------------------------------------------------------------------------rJMFF033G19  
  35 ------------------------------------------------------------------------->JMFF007G20                             
     <----------------------------------------------------------------------------------------------rJMFF007G20  
  38  -------------------------------------------------------------------------->JMFF036H08                           
      <---------------------------------------------------------------------------------------------rJMFF036H08  
  52 --------------------------------------------------------------------------------------------------->JMSF046P16   
               <----------------------------------------------------------------------------------rJMSF046P16  
  53 ------------------------------------------------------------------------------------------------>JMSF022N03      
     <--------------------------------------------------------------------------------------------rJMSF022N03  
  55 --------------------------------------------------------------------->JMSF019M08                                 
      <-------------------------------------------------------------------------------------------rJMSF019M08  
  56  ---------------------------------------------------->JMSF017I24                                                 
     <-------------------------------------------------------------------------------------------rJMSF017I24  
  58  -------------------------------------------------------------------------------------------------->JMSF041P02   
     <-------------------------------------------------------------------------------------------rJMSF041P02  
 240                           ------------------------------------------------------------------------->JMSF037L11   
                               <-----------------------------------------------------------------rJMSF037L11  
 438 ------------------------------------------------------------------------------------------------->JMSF047H07     
                 <------------------------rJMSF047H07

The following clones don't have the opposite end in this pair.

       ------------------------------------------------------------------------------------------->JMFN010I24-        
       <----------------------------------------------------------------------------------------rJMSF019K02*          
     <-------------------------------------------------------------------------------------------rJMSF010I22*         
     <-------------------------------------------------------------------------------------------rJMSF019L08-