List of clones in pair P011493.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A23Sequence604011374 (22)ref|XP_008644390.1|2e-96PREDICTED: 40S ribosomal protein S23-like [Zea mays]614011374 (22)ref|XP_008644390.1|3e-96PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMFF015F07Sequence611011374 (22)ref|XP_008644390.1|1e-96PREDICTED: 40S ribosomal protein S23-like [Zea mays]619011374 (22)ref|XP_008644390.1|1e-96PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMFF025I11Sequence614011374 (22)ref|XP_008644390.1|2e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]626011374 (22)ref|XP_008644390.1|3e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMFF046D11Sequence550011374 (22)ref|XP_008644390.1|2e-95PREDICTED: 40S ribosomal protein S23-like [Zea mays]462011374 (22)sp|Q9M5Z9.1|RS23_EUPES3e-59RecName: Full=40S ribosomal protein S23 [Euphorbia esula] gb|AAF26742.1|AF220539
JMFN017J01Sequence598011374 (22)ref|XP_008644390.1|2e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMFN025M20Sequence614011374 (22)ref|XP_008644390.1|1e-96PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMFN042E13Sequence612011374 (22)ref|XP_008644390.1|2e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMFN043G24Sequence629011374 (22)ref|XP_008644390.1|3e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMFN046L05Sequence539011374 (22)ref|XP_008644390.1|1e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMSF007P08Sequence235011374 (22)emb|CBI32689.3|5e-28unnamed protein product [Vitis vinifera]607011374 (22)ref|XP_008644390.1|2e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMSF011P20Sequence231011374 (22)emb|CBI32689.3|5e-28unnamed protein product [Vitis vinifera]605011374 (22)ref|XP_008644390.1|2e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMSF047L08Sequence652011374 (22)ref|XP_008644390.1|4e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]597011374 (22)ref|XP_008644390.1|2e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]
JMSF050I08Sequence678011374 (22)ref|XP_008644390.1|5e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]627011374 (22)ref|XP_008644390.1|3e-97PREDICTED: 40S ribosomal protein S23-like [Zea mays]

Contig 11374 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011374============================================ 660         
  33  ---------------------------------------------------------------------------->JMSF050I08                         
      <----------------------------------------------------------------------------------------------rJMSF050I08  
  38   ------------------------------------------------------------------------------------------->JMFF025I11         
       <---------------------------------------------------------------------------------------------rJMFF025I11  
  41   -------------------------------------------------------------------------------------------->JMFF015F07        
       <---------------------------------------------------------------------------------------------rJMFF015F07  
  46    ------------------------------------------------------------------------------------------->JMFF006A23        
        <--------------------------------------------------------------------------------------------rJMFF006A23  
  55   ---------------------------------->JMSF007P08                                                                  
       <-------------------------------------------------------------------------------------------rJMSF007P08  
  58   ---------------------------------->JMSF011P20                                                                  
       <------------------------------------------------------------------------------------------rJMSF011P20  
  67    -------------------------------------------------------------------------->JMSF047L08                         
        <-----------------------------------------------------------------------------------------rJMSF047L08  
 151  --------------------------------------------------------------------------------->JMFF046D11                    
                                       <-------------------------------------------rJMFF046D11  

The following clones don't have the opposite end in this pair.

         ---------------------------------------------------------------------------------------------->JMFN043G24-   
            -------------------------------------------------------------------------------------------->JMFN025M20-  
           ------------------------------------------------------------------------------------------>JMFN017J01-     
          -------------------------------------------------------------------------------------------->JMFN042E13-    
     <---------------------------------------------------------------------------------------------rJMSF036H08*       
          --------------------------------------------------------------------------------->JMFN046L05-