clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003L22 | Sequence | 477 | 012567 (15) | gb|KHG04267.1| | 2e-82 | ADP-ribosylation factor [Gossypium arboreum] | 735 | 012567 (15) | emb|CBI25984.3| | 5e-127 | unnamed protein product [Vitis vinifera] |
JMFF006H01 | Sequence | 566 | 012567 (15) | gb|KJB11520.1| | 2e-119 | hypothetical protein B456_001G263300 [Gossypium raimondii] | 658 | 012567 (15) | gb|KJB60588.1| | 2e-87 | hypothetical protein B456_009G337500 [Gossypium raimondii] gb|KJB60589.1| hypoth |
JMFF027J07 | Sequence | 565 | 012567 (15) | gb|KHG04267.1| | 2e-106 | ADP-ribosylation factor [Gossypium arboreum] | 683 | 012567 (15) | emb|CDX95712.1| | 3e-113 | BnaC03g25930D [Brassica napus] |
JMSF008M13 | Sequence | 338 | 012567 (15) | ref|XP_008811520.1| | 4e-67 | PREDICTED: ADP-ribosylation factor 1-like [Phoenix dactylifera] ref|XP_008811521 | 774 | 012567 (15) | ref|XP_007205794.1| | 1e-121 | hypothetical protein PRUPE_ppa010615mg [Prunus persica] gb|EMJ06993.1| hypotheti |
JMSF015P05 | Sequence | 492 | 012567 (15) | gb|KHG04267.1| | 3e-95 | ADP-ribosylation factor [Gossypium arboreum] | 783 | 012567 (15) | emb|CBI25984.3| | 4e-129 | unnamed protein product [Vitis vinifera] |
JMSF023K04 | Sequence | 610 | 012567 (15) | gb|KHG04267.1| | 1e-127 | ADP-ribosylation factor [Gossypium arboreum] | 724 | 012567 (15) | emb|CDX95712.1| | 2e-121 | BnaC03g25930D [Brassica napus] |
JMSF047D21 | Sequence | 721 | 012567 (15) | emb|CDX95712.1| | 2e-115 | BnaC03g25930D [Brassica napus] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012567============================================ 844 1 --------------------------------------------------------->JMSF015P05 <--------------------------------------------------------------------------------------------rJMSF015P05 8 ------------------------------------------------------------------------>JMSF023K04 <-------------------------------------------------------------------------------------rJMSF023K04 43 ------------------------------------------------------------------>JMFF006H01 <-----------------------------------------------------------------------------rJMFF006H01 98 ------------------------------------>JMSF008M13 <-------------------------------------------------------------------------------------rJMSF008M13 115 ----------------------------------------->JMFF003L22 <--------------------------------------------------------------------------------------rJMFF003L22 116 --------------------------------------------------->JMFF027J07 <--------------------------------------------------------------------------------rJMFF027J07
The following clones don't have the opposite end in this pair.
<---------------------------------------------------------------------------------rJMSF047D21- --------------------------------------------------------------------------->JMSF036H18# <-------------------------------------------------------------------------------------rJMSF001C15*