clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011A24 | Sequence | 568 | 002609 (14) | ref|XP_002528284.1| | 9e-103 | phospholipase C, putative [Ricinus communis] gb|EEF34122.1| phospholipase C, put | 705 | 002609 (14) | ref|XP_010271561.1| | 1e-99 | PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Nelumbo nu |
JMFF029I19 | Sequence | 242 | 002609 (14) | ref|XP_009620255.1| | 2e-14 | PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Nicotiana | 701 | 002609 (14) | ref|XP_002528284.1| | 1e-98 | phospholipase C, putative [Ricinus communis] gb|EEF34122.1| phospholipase C, put |
JMFN004C23 | Sequence | 644 | 002609 (14) | ref|XP_010271561.1| | 2e-100 | PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Nelumbo nu | |||||
JMFN043K01 | Sequence | 619 | 002609 (14) | ref|XP_010271561.1| | 2e-97 | PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Nelumbo nu | |||||
JMFS029E12 | Sequence | 606 | 002609 (14) | ref|XP_002528284.1| | 2e-115 | phospholipase C, putative [Ricinus communis] gb|EEF34122.1| phospholipase C, put | |||||
JMFS041H05 | Sequence | 623 | 002609 (14) | ref|XP_002528284.1| | 5e-119 | phospholipase C, putative [Ricinus communis] gb|EEF34122.1| phospholipase C, put | |||||
JMSF002A04 | Sequence | 292 | 002609 (14) | gb|AFK49042.1| | 2e-40 | unknown [Lotus japonicus] | 733 | 002609 (14) | ref|XP_010271561.1| | 4e-115 | PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Nelumbo nu |
JMSF031D16 | Sequence | 670 | 002609 (14) | ref|XP_010271561.1| | 3e-135 | PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Nelumbo nu | 749 | 002609 (14) | ref|XP_002528284.1| | 1e-125 | phospholipase C, putative [Ricinus communis] gb|EEF34122.1| phospholipase C, put |
JMSF032I12 | Sequence | 604 | 002609 (14) | ref|XP_002528284.1| | 9e-119 | phospholipase C, putative [Ricinus communis] gb|EEF34122.1| phospholipase C, put | 704 | 002609 (14) | ref|XP_010271561.1| | 1e-106 | PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Nelumbo nu |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002609============================================1267 94 -------------------------------------------->JMFF011A24 <-------------------------------------------------------rJMFF011A24 139 ---------------------->JMSF002A04 <--------------------------------------------------------rJMSF002A04 142 <------------------JMFF029I19 ------------------------------------------------------>rJMFF029I19 170 ----------------------------------------------->JMSF032I12 <-----------------------------------------------------rJMSF032I12 223 <----------------------------------------------------JMSF031D16 ---------------------------------------------------------->rJMSF031D16
The following clones don't have the opposite end in this pair.
<------------------------------------------------JMFN043K01- -------------------------------------------------->JMFN004C23- ----------------------------------------------->JMFS029E12- ------------------------------------------------>JMFS041H05-