List of clones in pair P011389.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001G23Sequence495009152 (24)ref|XP_009624885.1|5e-75PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]686009152 (24)gb|ACU87558.1|6e-72PIP protein [Gossypium hirsutum] gb|KHG24536.1| putative aquaporin PIP2-2 [Gossy
JMFF020K05Sequence518009152 (24)ref|XP_009624885.1|2e-64PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]782009152 (24)ref|XP_009624885.1|1e-102PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMFF026C22Sequence519009152 (24)ref|XP_009624885.1|4e-76PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]714009152 (24)ref|XP_009624885.1|9e-86PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMFF029E22Sequence520009152 (24)ref|XP_009624885.1|4e-76PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]716009152 (24)gb|ACU87558.1|2e-77PIP protein [Gossypium hirsutum] gb|KHG24536.1| putative aquaporin PIP2-2 [Gossy
JMFF035J16Sequence520009152 (24)ref|XP_009624885.1|4e-76PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]709009152 (24)ref|XP_009624885.1|5e-84PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMFF040C04Sequence496009152 (24)ref|XP_009624885.1|2e-66PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]751009152 (24)ref|XP_009624885.1|6e-129PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMFN033F12Sequence615009152 (24)ref|XP_009624885.1|2e-101PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMFS047C11Sequence618009152 (24)ref|XP_009624885.1|7e-103PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMFS140C05Sequence626009152 (24)ref|XP_009624885.1|2e-117PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMSF014P12Sequence437009152 (24)ref|XP_009624885.1|5e-55PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]796009152 (24)ref|XP_009624885.1|2e-110PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMSF024I21Sequence687009152 (24)ref|XP_009624885.1|3e-116PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]775009152 (24)ref|XP_009624885.1|9e-108PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]
JMSF033F17Sequence665009152 (24)ref|XP_009624885.1|6e-109PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]779009152 (24)ref|XP_009624885.1|9e-108PREDICTED: aquaporin PIP2-1-like [Nicotiana tomentosiformis]

Contig 9152 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig009152============================================1243         
   3 ----------------------------------------->JMFF035J16                                                             
                                                <---------------------------------------------------------rJMFF035J16  
  12 ----------------------------------------->JMFF020K05                                                             
                                          <--------------------------------------------------------------rJMFF020K05  
  12 ----------------------------------------->JMFF026C22                                                             
                                               <--------------------------------------------------------rJMFF026C22  
  12 ----------------------------------------->JMFF029E22                                                             
                                               <--------------------------------------------------------rJMFF029E22  
  25 ----------------------------------------------------->JMSF033F17                                                 
                                        <--------------------------------------------------------------rJMSF033F17  
  32 ---------------------------------->JMSF014P12                                                                    
                                      <----------------------------------------------------------------rJMSF014P12  
  32 ------------------------------------------------------>JMSF024I21                                                
                                        <--------------------------------------------------------------rJMSF024I21  
  50  --------------------------------------->JMFF001G23                                                              
                                               <------------------------------------------------------rJMFF001G23  
 207   --------------------------------------->JMFF040C04                                                             
                                 <--------------------------------------------------------rJMFF040C04

The following clones don't have the opposite end in this pair.

     ---------------------->JMSF001D05*                                                                               
       ------------------------------------------------->JMFN033F12-                                                  
                                <------------------------------------------------rJMSF018M04*                         
          -------------------------------------------------->JMFS140C05-                                              
       ------------------------------------------------->JMFS047C11-                                                  
     --------------------------------------------->JMFF050J19#