| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF020M07 | Sequence | 187 | 000894 (21) | 649 | 000894 (21) | ref|XP_004248758.1| | 4e-63 | PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum] | |||
| JMFF027H24 | Sequence | 321 | 000894 (21) | 677 | 000894 (21) | ref|XP_004248758.1| | 1e-72 | PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum] | |||
| JMFN009F20 | Sequence | 614 | 000894 (21) | emb|CDO97205.1| | 1e-90 | unnamed protein product [Coffea canephora] | |||||
| JMFN011I24 | Sequence | 611 | 000894 (21) | ref|XP_006356575.1| | 1e-54 | PREDICTED: uncharacterized protein At4g06744-like [Solanum tuberosum] | |||||
| JMFN031G01 | Sequence | 641 | 000894 (21) | ref|XP_004248758.1| | 9e-56 | PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum] | |||||
| JMFS080C03 | Sequence | 627 | 000894 (21) | ref|XP_009762067.1| | 5e-100 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana sylvestris] | |||||
| JMSF001N02 | Sequence | 411 | 000894 (21) | ref|XP_009762067.1| | 9e-09 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana sylvestris] | 648 | 000894 (21) | ref|XP_004248758.1| | 2e-69 | PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum] |
| JMSF003P04 | Sequence | 270 | 000894 (21) | 693 | 000894 (21) | ref|XP_006356575.1| | 3e-75 | PREDICTED: uncharacterized protein At4g06744-like [Solanum tuberosum] | |||
| JMSF012K17 | Sequence | 521 | 000894 (21) | ref|XP_004248758.1| | 1e-25 | PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum] | 654 | 000894 (21) | ref|XP_006356575.1| | 5e-65 | PREDICTED: uncharacterized protein At4g06744-like [Solanum tuberosum] |
| JMSF029K17 | Sequence | 646 | 000894 (21) | ref|XP_009762067.1| | 1e-47 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana sylvestris] | 695 | 000894 (21) | ref|XP_006356575.1| | 4e-79 | PREDICTED: uncharacterized protein At4g06744-like [Solanum tuberosum] |
| JMSF039F07 | Sequence | 650 | 000894 (21) | ref|XP_009762067.1| | 2e-47 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana sylvestris] | 872 | 000894 (21) | emb|CDO97205.1| | 3e-104 | unnamed protein product [Coffea canephora] |
| JMSF049L18 | Sequence | 115 | 000894 (21) | ||||||||
| JMSF052D21 | Sequence | 651 | 000894 (21) | ref|XP_009762067.1| | 3e-48 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana sylvestris] | 845 | 000894 (21) | emb|CDO97205.1| | 5e-105 | unnamed protein product [Coffea canephora] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig000894============================================1511 28 ------------------------------------------>JMSF039F07 <--------------------------------------------------------rJMSF039F07 32 ----------->JMFF020M07 <-----------------------------------------rJMFF020M07 37 -------------------->JMFF027H24 <--------------------------------------------rJMFF027H24 43 --------------------------------->JMSF012K17 <------------------------------------------rJMSF012K17 46 ------------------------------------------>JMSF029K17 <---------------------------------------------rJMSF029K17 46 ------------------------------------------>JMSF052D21 <-------------------------------------------------------rJMSF052D21 53 ----------------->JMSF003P04 <---------------------------------------------rJMSF003P04 54 -------------------------->JMSF001N02 <------------------------------------------rJMSF001N02
The following clones don't have the opposite end in this pair.
--------------------------------------->JMFN011I24- ------->JMSF049L18- ---------------------------------------->JMFN009F20- ----------------------------------------->JMFN031G01- ---------------------------------------->JMFS080C03-