List of clones in pair P011339.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002G06Sequence552010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFF010E15Sequence550010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]527010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFF015A03Sequence650010335 (50)ref|XP_006343129.1|4e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]498010335 (50)
JMFF017K05Sequence555010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]527010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFF021H12Sequence547010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]525010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFF022K09Sequence495010335 (50)ref|XP_006343129.1|6e-20PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]647010335 (50)
JMFF032L03Sequence647010335 (50)ref|XP_006343129.1|4e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]645010335 (50)
JMFF050F17Sequence607010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]595010335 (50)ref|XP_006343129.1|3e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN003P14Sequence490010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN004I05Sequence518010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN006K02Sequence477010335 (50)emb|CDO97873.1|6e-21unnamed protein product [Coffea canephora]
JMFN010K18Sequence549010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN011H03Sequence621010335 (50)ref|XP_006343129.1|3e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN011M18Sequence518010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN014G22Sequence440010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN015K05Sequence501010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN015K12Sequence518010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN017F22Sequence486010335 (50)ref|XP_008222678.1|87.4PREDICTED: putative lipid-transfer protein DIR1 [Prunus mume]
JMFN020A05Sequence523010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN025G03Sequence522010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN025J09Sequence443010335 (50)ref|XP_009790835.1|1e-19PREDICTED: LOW QUALITY PROTEIN: putative lipid-transfer protein DIR1 [Nicotiana
JMFN028M14Sequence473010335 (50)emb|CDO97873.1|6e-21unnamed protein product [Coffea canephora]
JMFN029K08Sequence494010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN032D14Sequence499010335 (50)ref|XP_006343129.1|1e-09PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN035I20Sequence529010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN036M03Sequence581010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN037L17Sequence507010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN040D18Sequence521010335 (50)ref|XP_006343129.1|1e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFN040N17Sequence487010335 (50)emb|CDO97873.1|5e-21unnamed protein product [Coffea canephora]
JMFN042M22Sequence520010335 (50)ref|XP_009790835.1|3e-12PREDICTED: LOW QUALITY PROTEIN: putative lipid-transfer protein DIR1 [Nicotiana
JMFN044C24Sequence529010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFS054F08Sequence490010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFS074H07Sequence525010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFS086C03Sequence525010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMFS099C07Sequence466010335 (50)emb|CDO97873.1|6e-21unnamed protein product [Coffea canephora]
JMFS099C08Sequence425010335 (50)emb|CDO97873.1|1e-19unnamed protein product [Coffea canephora]
JMFS158H10Sequence520010335 (50)ref|XP_006343129.1|4e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMSF022H22Sequence463010335 (50)ref|XP_006343129.1|9e-20PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]419010335 (50)ref|XP_006343129.1|5e-20PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]
JMSF044E10Sequence545010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]498010335 (50)ref|XP_006343129.1|9e-20PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]

Contig 10335 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010335============================================1135         
 208                   -------------------------------------------->JMFF022K09                                        
                                                <--------------------------------------------------------rJMFF022K09  
 208                   --------------------------------------------------------->JMFF032L03                           
                                               <---------------------------------------------------------rJMFF032L03  
 251                   --------------------------------------------------------->JMFF015A03                           
                                                          <------------------------------------------rJMFF015A03  
 366 ----------------------------------------------------->JMFF050F17                                                 
                       <-------------------------------------------------rJMFF050F17  
 603           ------------------------------------------------->JMFF010E15                                           
               <----------------------------------------------rJMFF010E15  
 603           ------------------------------------------------->JMFF017K05                                           
               <----------------------------------------------rJMFF017K05  
 605            ------------------------------------------------>JMFF021H12                                           
                <----------------------------------------------rJMFF021H12  
 633            ------------------------------------------------>JMSF044E10                                           
                <-------------------------------------------rJMSF044E10  
 716                   ----------------------------------------->JMSF022H22                                           
                       <------------------------------------rJMSF022H22

The following clones don't have the opposite end in this pair.

                             ------------------------------------------->JMFN017F22-                                  
                 ---------------------------------------------->JMFS074H07-                                           
                 --------------------------------------------------->JMFN036M03-                                      
                         --------------------------------------->JMFN025J09-                                          
                 --------------------------------------------->JMFN011M18-                                            
                 ---------------------------------------------->JMFN035I20-                                           
                 ---------------------------------------------->JMFN020A05-                                           
                   -------------------------------------------->JMFN032D14-                                           
                  ---------------------------------------------->JMFN042M22-                                          
                          ------------------------------------>JMFN028M14-                                            
                         ------------------------------------->JMFN040N17-                                            
                        -------------------------------------->JMFN014G22-                                            
                ------------------------------------------------>JMSF034F14*                                          
                   --------------------------------------------->JMFN037L17-                                          
                 ---------------------------------------------->JMFN025G03-                                           
                          ------------------------------------>JMFN006K02-                                            
                    ------------------------------------------->JMFN029K08-                                           
                  --------------------------------------------->JMFN004I05-                                           
                  --------------------------------------------->JMFN015K12-                                           
                          ------------------------------------->JMFS099C08-                                           
                  ------------------------------------------------------->JMFN011H03-                                 
                          ---------------------------------------->JMFS099C07-                                        
                         ------------------------------------------->JMFS054F08-                                      
                    ------------------------------------------->JMFN003P14-                                           
                 ---------------------------------------------->JMFN044C24-                                           
                ------------------------------------------------>JMFF002G06-                                          
                 ---------------------------------------------->JMFS086C03-                                           
                 ---------------------------------------------->JMFS158H10-                                           
                   -------------------------------------------->JMFN015K05-                                           
                  --------------------------------------------->JMFN010K18-                                           
                                              <--------rJMFF006O14#                                                   
                  ---------------------------------------------->JMFN040D18-