clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002N08 | Sequence | 286 | 004642 (19) | gb|ACD69679.1| | 4e-15 | 14-3-3, partial [Mangifera indica] | 735 | 004642 (19) | ref|XP_009623182.1| | 2e-102 | PREDICTED: 14-3-3-like protein 16R [Nicotiana tomentosiformis] ref|XP_009773768. |
JMFF010M02 | Sequence | 611 | 004642 (19) | gb|AGJ98234.1| | 8e-89 | PIB67 14-3-3 protein [Petunia x hybrida] | 633 | 004642 (19) | gb|AGJ98234.1| | 1e-88 | PIB67 14-3-3 protein [Petunia x hybrida] |
JMFF013G08 | Sequence | 610 | 004642 (19) | gb|AGJ98234.1| | 3e-85 | PIB67 14-3-3 protein [Petunia x hybrida] | |||||
JMFF027C08 | Sequence | 522 | 004642 (19) | ref|XP_009623182.1| | 1e-78 | PREDICTED: 14-3-3-like protein 16R [Nicotiana tomentosiformis] ref|XP_009773768. | 684 | 004642 (19) | ref|XP_009623182.1| | 5e-102 | PREDICTED: 14-3-3-like protein 16R [Nicotiana tomentosiformis] ref|XP_009773768. |
JMFF044N21 | Sequence | 631 | 004642 (19) | emb|CAC84142.3| | 6e-109 | 14-3-3 protein [Nicotiana tabacum] | 596 | 004642 (19) | gb|AGJ98234.1| | 1e-75 | PIB67 14-3-3 protein [Petunia x hybrida] |
JMFF044O12 | Sequence | 644 | 004642 (19) | emb|CAC84142.3| | 7e-107 | 14-3-3 protein [Nicotiana tabacum] | 643 | 004642 (19) | gb|AGJ98234.1| | 9e-70 | PIB67 14-3-3 protein [Petunia x hybrida] |
JMFF047K03 | Sequence | 501 | 004642 (19) | emb|CAC84142.3| | 6e-74 | 14-3-3 protein [Nicotiana tabacum] | 444 | 004642 (19) | emb|CAC84142.3| | 7e-24 | 14-3-3 protein [Nicotiana tabacum] |
JMFN006L07 | Sequence | 615 | 004642 (19) | emb|CAC84142.3| | 9e-108 | 14-3-3 protein [Nicotiana tabacum] | |||||
JMFN012D15 | Sequence | 627 | 004642 (19) | emb|CAC84142.3| | 2e-114 | 14-3-3 protein [Nicotiana tabacum] | |||||
JMFN041D06 | Sequence | 633 | 004642 (19) | ref|XP_009623182.1| | 9e-123 | PREDICTED: 14-3-3-like protein 16R [Nicotiana tomentosiformis] ref|XP_009773768. | |||||
JMFS070H12 | Sequence | 416 | 004642 (19) | emb|CAC84142.3| | 5e-24 | 14-3-3 protein [Nicotiana tabacum] | |||||
JMFS089D03 | Sequence | 627 | 004642 (19) | emb|CAC84142.3| | 6e-115 | 14-3-3 protein [Nicotiana tabacum] | |||||
JMFS100G10 | Sequence | 623 | 004642 (19) | emb|CAC84142.3| | 2e-111 | 14-3-3 protein [Nicotiana tabacum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004642============================================1142 62 ---------------------------------------------------->JMFF044N21 <---------------------------------------------------rJMFF044N21 67 ------------------------------------------------>JMFF044O12 <-------------------------------------------------------rJMFF044O12 80 ------------------------------------>JMFF047K03 <--------------------------------------rJMFF047K03 94 ------------------------>JMFF002N08 <--------------------------------------------------------------rJMFF002N08 148 -------------------------------------->JMFF027C08 <-----------------------------------------------------------rJMFF027C08 518 ----------------------------------------------------->JMFF010M02 <------------------------------------------------------rJMFF010M02
The following clones don't have the opposite end in this pair.
<----------------------------------------------------rJMFF013G08- ------------------------------------------------------>JMFS089D03- ------------------------------------------------------>JMFN012D15- ------------------------------------------------------>JMFS100G10- ------------------------------------------------------>JMFN041D06- ----------------------------------->JMFS070H12- ----------------------------------------------------->JMFN006L07-