| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004N21 | Sequence | 567 | 008797 (19) | ref|XP_009772296.1| | 2e-109 | PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nicotiana sylvestris] | 684 | 008797 (19) | ref|XP_004234315.1| | 1e-59 | PREDICTED: 40S ribosomal protein SA-like [Solanum lycopersicum] |
| JMFF020K09 | Sequence | 569 | 008797 (19) | ref|XP_009772296.1| | 2e-109 | PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nicotiana sylvestris] | 726 | 008797 (19) | ref|XP_004234315.1| | 2e-73 | PREDICTED: 40S ribosomal protein SA-like [Solanum lycopersicum] |
| JMFF026E05 | Sequence | 567 | 008797 (19) | ref|XP_009772296.1| | 1e-107 | PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nicotiana sylvestris] | 718 | 008797 (19) | ref|XP_004234315.1| | 5e-58 | PREDICTED: 40S ribosomal protein SA-like [Solanum lycopersicum] |
| JMFF043N12 | Sequence | 622 | 008797 (19) | ref|XP_009602638.1| | 1e-122 | PREDICTED: 40S ribosomal protein SA {ECO:0000255|HAMAP-Rule:MF_03015}-like [Nic | 574 | 008797 (19) | ref|XP_004234315.1| | 1e-24 | PREDICTED: 40S ribosomal protein SA-like [Solanum lycopersicum] |
| JMFF045K15 | Sequence | 622 | 008797 (19) | ref|XP_009772296.1| | 1e-120 | PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nicotiana sylvestris] | 533 | 008797 (19) | ref|XP_011074611.1| | 1e-21 | PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein SA-like [Sesamum indicum] |
| JMFF051F03 | Sequence | 600 | 008797 (19) | ref|XP_009602638.1| | 1e-117 | PREDICTED: 40S ribosomal protein SA {ECO:0000255|HAMAP-Rule:MF_03015}-like [Nic | 435 | 008797 (19) | gb|ABA81872.1| | 5e-11 | ribosome-associated protein p40-like [Solanum tuberosum] |
| JMFN011F04 | Sequence | 455 | 008797 (19) | ref|NP_001275039.1| | 7e-17 | 40S ribosomal protein SA-like [Solanum tuberosum] gb|ABB29931.1| P40-like protei | |||||
| JMFN011H04 | Sequence | 526 | 008797 (19) | ref|XP_004234315.1| | 9e-13 | PREDICTED: 40S ribosomal protein SA-like [Solanum lycopersicum] | |||||
| JMFN025P19 | Sequence | 636 | 008797 (19) | ref|XP_004234315.1| | 2e-82 | PREDICTED: 40S ribosomal protein SA-like [Solanum lycopersicum] | |||||
| JMFN029P06 | Sequence | 538 | 008797 (19) | ref|XP_009772296.1| | 1e-104 | PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nicotiana sylvestris] | |||||
| JMFN033E15 | Sequence | 606 | 008797 (19) | ref|XP_009772296.1| | 4e-128 | PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nicotiana sylvestris] | |||||
| JMFS110E12 | Sequence | 627 | 008797 (19) | ref|XP_009772296.1| | 8e-128 | PREDICTED: 40S ribosomal protein SA-like isoform X2 [Nicotiana sylvestris] | |||||
| JMSF027E22 | Sequence | 626 | 008797 (19) | ref|XP_009602638.1| | 6e-127 | PREDICTED: 40S ribosomal protein SA {ECO:0000255|HAMAP-Rule:MF_03015}-like [Nic | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig008797============================================1175 1 ----------------------------------------------->JMFF026E05 <------------------------------------------------------------rJMFF026E05 48 --------------------------------------------------->JMFF045K15 <---------------------------------------------rJMFF045K15 53 ----------------------------------------------->JMFF004N21 <---------------------------------------------------------rJMFF004N21 53 -------------------------------------------------->JMFF051F03 <------------------------------------rJMFF051F03 55 --------------------------------------------------->JMFF043N12 <----------------------------------------------rJMFF043N12 58 ----------------------------------------------->JMFF020K09 <-------------------------------------------------------------rJMFF020K09
The following clones don't have the opposite end in this pair.
----------------------------------------------------->JMFN025P19- ------------------------------------>JMFN011F04- --------------------------------------------------->JMFN033E15- ----------------------------------------->JMFN011H04- ---------------------------------------------------->JMSF027E22- --------------------------------------------->JMFN029P06- ---------------------------------------------------->JMFS110E12-