List of clones in pair P011244.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002L09Sequence577013784 (25)emb|CDO98221.1|3e-57unnamed protein product [Coffea canephora]611013784 (25)emb|CDO98221.1|4e-57unnamed protein product [Coffea canephora]
JMFF006O02Sequence460013784 (25)ref|XP_002302129.1|7e-6940S ribosomal protein S12-1 [Populus trichocarpa] gb|EEE81402.1| 40S ribosomal p628013784 (25)emb|CDO98221.1|3e-78unnamed protein product [Coffea canephora]
JMFF026N24Sequence489013784 (25)ref|XP_002302129.1|3e-7140S ribosomal protein S12-1 [Populus trichocarpa] gb|EEE81402.1| 40S ribosomal p648013784 (25)emb|CDO98221.1|8e-79unnamed protein product [Coffea canephora]
JMFF035E13Sequence577013784 (25)emb|CDO98221.1|1e-78unnamed protein product [Coffea canephora]566013784 (25)emb|CDO98221.1|3e-78unnamed protein product [Coffea canephora]
JMFF039N04Sequence571013784 (25)emb|CDO98221.1|1e-78unnamed protein product [Coffea canephora]665013784 (25)emb|CDO98221.1|5e-78unnamed protein product [Coffea canephora]
JMFF045H01Sequence639013784 (25)emb|CDO98221.1|1e-77unnamed protein product [Coffea canephora]483013784 (25)ref|XP_011026209.1|2e-37PREDICTED: 40S ribosomal protein S12-like [Populus euphratica] gb|ABK93056.1| un
JMFF046G04Sequence557013784 (25)emb|CDO98221.1|3e-79unnamed protein product [Coffea canephora]563013784 (25)emb|CDO98221.1|6e-81unnamed protein product [Coffea canephora]
JMFF047C01Sequence445013784 (25)ref|XP_002302129.1|2e-6440S ribosomal protein S12-1 [Populus trichocarpa] gb|EEE81402.1| 40S ribosomal p323013784 (25)emb|CDO98221.1|4e-31unnamed protein product [Coffea canephora]
JMFN011A14Sequence601013784 (25)emb|CDO98221.1|5e-78unnamed protein product [Coffea canephora]
JMFN029L17Sequence565013784 (25)emb|CDO98221.1|1e-78unnamed protein product [Coffea canephora]
JMFN038P05Sequence611013784 (25)emb|CDO98221.1|6e-78unnamed protein product [Coffea canephora]
JMFS066F07Sequence620013784 (25)emb|CDO98221.1|2e-78unnamed protein product [Coffea canephora]
JMFS076G12Sequence627013784 (25)emb|CDO98221.1|2e-78unnamed protein product [Coffea canephora]
JMSF028L14Sequence639013784 (25)emb|CDO98221.1|3e-78unnamed protein product [Coffea canephora]592013784 (25)emb|CDO98221.1|2e-78unnamed protein product [Coffea canephora]
JMSF029F19Sequence644013784 (25)emb|CDO98221.1|4e-78unnamed protein product [Coffea canephora]600013784 (25)emb|CDO98221.1|2e-78unnamed protein product [Coffea canephora]

Contig 13784 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013784============================================ 689         
  41       ------------------------------------------------------------------------------------------->JMFF045H01     
                                   <---------------------------------------------------------------------rJMFF045H01  
  42      --------------------------------------------------------------->JMFF047C01                                  
                                                         <----------------------------------------------rJMFF047C01  
  43      ---------------------------------------------------------------------------->JMFF046G04                     
                      <---------------------------------------------------------------------------------rJMFF046G04  
  59      ---------------------------------------------------------------------------------->JMFF039N04               
     <------------------------------------------------------------------------------------------------rJMFF039N04  
  60      ------------------------------------------------------------------>JMFF006O02                               
          <------------------------------------------------------------------------------------------rJMFF006O02  
  65      ------------------------------------------------------------------>JMFF026N24                               
          <------------------------------------------------------------------------------------------rJMFF026N24  
  85        ----------------------------------------------------------------------------------->JMFF002L09            
            <---------------------------------------------------------------------------------------rJMFF002L09  
  86        ----------------------------------------------------------------------------------->JMFF035E13            
                 <---------------------------------------------------------------------------------rJMFF035E13  
  90       -------------------------------------------------------------------------------------------->JMSF029F19    
           <--------------------------------------------------------------------------------------rJMSF029F19  
  97        ------------------------------------------------------------------------------------------->JMSF028L14    
            <-------------------------------------------------------------------------------------rJMSF028L14

The following clones don't have the opposite end in this pair.

            ------------------------------------------------------------------------------------------>JMFS076G12-    
            ----------------------------------------------------------------------------------------->JMFS066F07-     
                      -------------------------------------------------------------------------->JMFN029L17-          
               ---------------------------------------------------------------------------------------->JMFN038P05-   
                ----------------------------------------------------------------------------------->JMFN011A14-