clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF016G03 | Sequence | 625 | 006145 (15) | ref|XP_010245991.1| | 9e-68 | PREDICTED: cytochrome b5 [Nelumbo nucifera] | 678 | 006145 (15) | emb|CDP03875.1| | 4e-77 | unnamed protein product [Coffea canephora] |
JMFF033I10 | Sequence | 606 | 006145 (15) | emb|CDP03875.1| | 2e-77 | unnamed protein product [Coffea canephora] | 722 | 006145 (15) | emb|CDP03875.1| | 6e-77 | unnamed protein product [Coffea canephora] |
JMFN004C13 | Sequence | 273 | 006145 (15) | ref|XP_001770042.1| | 5e-14 | predicted protein [Physcomitrella patens] gb|EDQ65218.1| predicted protein [Phys | |||||
JMFN004E02 | Sequence | 640 | 006145 (15) | emb|CDP03875.1| | 2e-77 | unnamed protein product [Coffea canephora] | |||||
JMFN010H02 | Sequence | 636 | 006145 (15) | emb|CDP03875.1| | 2e-77 | unnamed protein product [Coffea canephora] | |||||
JMFN019H12 | Sequence | 444 | 006145 (15) | emb|CDP03875.1| | 6e-50 | unnamed protein product [Coffea canephora] | |||||
JMFN019P08 | Sequence | 648 | 006145 (15) | emb|CDP03875.1| | 3e-77 | unnamed protein product [Coffea canephora] | |||||
JMFN035O22 | Sequence | 641 | 006145 (15) | emb|CDP03875.1| | 2e-77 | unnamed protein product [Coffea canephora] | |||||
JMSF011M10 | Sequence | 268 | 006145 (15) | ref|XP_011089100.1| | 1e-13 | PREDICTED: cytochrome b5-like [Sesamum indicum] | 684 | 006145 (15) | emb|CDP03875.1| | 4e-77 | unnamed protein product [Coffea canephora] |
JMSF045A08 | Sequence | 647 | 006145 (15) | emb|CDP03875.1| | 3e-77 | unnamed protein product [Coffea canephora] | 600 | 006145 (15) | emb|CDP03875.1| | 1e-77 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006145============================================ 771 44 ------------------------------------------------------------------------------>JMFF033I10 <---------------------------------------------------------------------------------------------rJMFF033I10 44 ------------------------------------------------------------------------------->JMFF016G03 <---------------------------------------------------------------------------------------rJMFF016G03 87 ---------------------------------->JMSF011M10 <----------------------------------------------------------------------------------------rJMSF011M10 170 ----------------------------------------------------------------------------------->JMSF045A08 <-----------------------------------------------------------------------------rJMSF045A08
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------------->JMFN004E02- <-----------------------------------------------------------------------------------------rJMSF051E04* ---------------------------------------------------------------------------------->JMFN010H02- ----------------------------------------------------------------------------------->JMFN019P08- --------------------------------->JMFN004C13- --------------------------------------------------------->JMFN019H12- ---------------------------------------------------------------------------------->JMFN035O22-