clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014O06 | Sequence | 394 | 005934 (14) | 836 | 005934 (14) | ref|XP_009632005.1| | 2e-50 | PREDICTED: cytochrome c oxidase subunit 6b-1-like [Nicotiana tomentosiformis] | |||
JMFF019N16 | Sequence | 538 | 005934 (14) | ref|XP_010521174.1| | 8e-28 | PREDICTED: cytochrome c oxidase subunit 6b-1-like [Tarenaya hassleriana] | 724 | 005934 (14) | ref|XP_009632005.1| | 1e-50 | PREDICTED: cytochrome c oxidase subunit 6b-1-like [Nicotiana tomentosiformis] |
JMFF041C18 | Sequence | 635 | 005934 (14) | ref|XP_004252528.1| | 2e-52 | PREDICTED: cytochrome c oxidase subunit 6b-1 [Solanum lycopersicum] | 621 | 005934 (14) | ref|XP_009632005.1| | 9e-51 | PREDICTED: cytochrome c oxidase subunit 6b-1-like [Nicotiana tomentosiformis] |
JMFF051B11 | Sequence | 634 | 005934 (14) | ref|XP_004252528.1| | 2e-54 | PREDICTED: cytochrome c oxidase subunit 6b-1 [Solanum lycopersicum] | 609 | 005934 (14) | ref|XP_009632005.1| | 5e-51 | PREDICTED: cytochrome c oxidase subunit 6b-1-like [Nicotiana tomentosiformis] |
JMFN042P15 | Sequence | 624 | 005934 (14) | ref|XP_004252528.1| | 5e-52 | PREDICTED: cytochrome c oxidase subunit 6b-1 [Solanum lycopersicum] | |||||
JMFN046E16 | Sequence | 609 | 005934 (14) | ref|XP_004252528.1| | 3e-52 | PREDICTED: cytochrome c oxidase subunit 6b-1 [Solanum lycopersicum] | |||||
JMSF048O19 | Sequence | 691 | 005934 (14) | ref|XP_004252528.1| | 5e-53 | PREDICTED: cytochrome c oxidase subunit 6b-1 [Solanum lycopersicum] | 770 | 005934 (14) | ref|XP_004252528.1| | 1e-52 | PREDICTED: cytochrome c oxidase subunit 6b-1 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005934============================================ 910 46 ------------------------------------------->JMFF014O06 <------------------------------------------------------------------------------------------rJMFF014O06 54 --------------------------------------------------------------------->JMFF051B11 <------------------------------------------------------------------rJMFF051B11 55 --------------------------------------------------------------------->JMFF041C18 <-------------------------------------------------------------------rJMFF041C18 75 ---------------------------------------------------------->JMFF019N16 <------------------------------------------------------------------------------rJMFF019N16 140 --------------------------------------------------------------------------->JMSF048O19 <------------------------------------------------------------------------------------rJMSF048O19
The following clones don't have the opposite end in this pair.
<----------------------------------------------rJMFF014O17# ---------------------->JMSF005M07* ------------------------------------------------------------------>JMFN046E16- -------------------------------------------------------------------->JMFN042P15-