clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF040K08 | Sequence | 515 | 001748 (24) | ref|XP_004241409.1| | 1e-42 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers | 684 | 001748 (24) | ref|XP_008454435.1| | 4e-78 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMFF045H20 | Sequence | 636 | 001748 (24) | ref|XP_006347293.1| | 1e-73 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub | 579 | 001748 (24) | ref|XP_008454435.1| | 2e-63 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMFN046B20 | Sequence | 595 | 001748 (24) | ref|XP_006347293.1| | 2e-127 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub | |||||
JMFS126A11 | Sequence | 629 | 001748 (24) | ref|XP_006347293.1| | 2e-83 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub | |||||
JMSF018M18 | Sequence | 485 | 001748 (24) | ref|XP_004241409.1| | 1e-48 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers | 701 | 001748 (24) | ref|XP_008454435.1| | 1e-98 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMSF024J22 | Sequence | 561 | 001748 (24) | ref|XP_004241409.1| | 4e-63 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers | 713 | 001748 (24) | ref|XP_008454435.1| | 3e-105 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMSF029K13 | Sequence | 641 | 001748 (24) | ref|XP_006347293.1| | 1e-82 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub | 680 | 001748 (24) | ref|XP_008454435.1| | 5e-99 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMSF032E24 | Sequence | 595 | 001748 (24) | ref|XP_004241409.1| | 2e-64 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers | 643 | 001748 (24) | ref|XP_008454435.1| | 4e-107 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMSF036L19 | Sequence | 570 | 001748 (24) | ref|XP_004241409.1| | 9e-65 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers | 704 | 001748 (24) | ref|XP_008454435.1| | 6e-95 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMSF039B22 | Sequence | 709 | 001748 (24) | ref|XP_006347293.1| | 2e-87 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub | 739 | 001748 (24) | ref|XP_008454435.1| | 1e-107 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMSF040J21 | Sequence | 679 | 001748 (24) | ref|XP_006347293.1| | 3e-113 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub | 828 | 001748 (24) | ref|XP_004147517.1| | 2e-150 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Cucumis sat |
JMSF044C03 | Sequence | 777 | 001748 (24) | ref|XP_006347293.1| | 3e-115 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub | 705 | 001748 (24) | ref|XP_008454435.1| | 8e-83 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
JMSF050K02 | Sequence | 561 | 001748 (24) | ref|XP_004241409.1| | 1e-64 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers | 699 | 001748 (24) | ref|XP_008454435.1| | 6e-99 | PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001748============================================1813 1 --------------------------->JMFF040K08 <-------------------------------------rJMFF040K08 87 ------------------------------>JMSF036L19 <-------------------------------------rJMSF036L19 88 -------------------------------------->JMSF039B22 <----------------------------------------rJMSF039B22 89 -------------------------->JMSF018M18 <--------------------------------------rJMSF018M18 90 ------------------------------>JMSF050K02 <--------------------------------------rJMSF050K02 107 ---------------------------------->JMSF029K13 <-------------------------------------rJMSF029K13 109 ------------------------------>JMSF024J22 <--------------------------------------rJMSF024J22 131 ------------------------------------------>JMSF044C03 <-----------------------------------rJMSF044C03 134 ---------------------------------->JMFF045H20 <----------------------------rJMFF045H20 152 -------------------------------->JMSF032E24 <-----------------------------------rJMSF032E24 262 ------------------------------------>JMSF040J21 <---------------------------------------------rJMSF040J21
The following clones don't have the opposite end in this pair.
-------------------------------->JMFN046B20- ---------------------------------->JMFS126A11-