List of clones in pair P011082.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040K08Sequence515001748 (24)ref|XP_004241409.1|1e-42PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers684001748 (24)ref|XP_008454435.1|4e-78PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMFF045H20Sequence636001748 (24)ref|XP_006347293.1|1e-73PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub579001748 (24)ref|XP_008454435.1|2e-63PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMFN046B20Sequence595001748 (24)ref|XP_006347293.1|2e-127PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub
JMFS126A11Sequence629001748 (24)ref|XP_006347293.1|2e-83PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub
JMSF018M18Sequence485001748 (24)ref|XP_004241409.1|1e-48PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers701001748 (24)ref|XP_008454435.1|1e-98PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMSF024J22Sequence561001748 (24)ref|XP_004241409.1|4e-63PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers713001748 (24)ref|XP_008454435.1|3e-105PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMSF029K13Sequence641001748 (24)ref|XP_006347293.1|1e-82PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub680001748 (24)ref|XP_008454435.1|5e-99PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMSF032E24Sequence595001748 (24)ref|XP_004241409.1|2e-64PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers643001748 (24)ref|XP_008454435.1|4e-107PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMSF036L19Sequence570001748 (24)ref|XP_004241409.1|9e-65PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers704001748 (24)ref|XP_008454435.1|6e-95PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMSF039B22Sequence709001748 (24)ref|XP_006347293.1|2e-87PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub739001748 (24)ref|XP_008454435.1|1e-107PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMSF040J21Sequence679001748 (24)ref|XP_006347293.1|3e-113PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub828001748 (24)ref|XP_004147517.1|2e-150PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Cucumis sat
JMSF044C03Sequence777001748 (24)ref|XP_006347293.1|3e-115PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Solanum tub705001748 (24)ref|XP_008454435.1|8e-83PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re
JMSF050K02Sequence561001748 (24)ref|XP_004241409.1|1e-64PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopers699001748 (24)ref|XP_008454435.1|6e-99PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Cucumis melo] re

Contig 1748 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001748============================================1813         
   1 --------------------------->JMFF040K08                                                                           
                                                                   <-------------------------------------rJMFF040K08  
  87    ------------------------------>JMSF036L19                                                                     
                                                                  <-------------------------------------rJMSF036L19  
  88    -------------------------------------->JMSF039B22                                                             
                                                               <----------------------------------------rJMSF039B22  
  89    -------------------------->JMSF018M18                                                                         
                                                                 <--------------------------------------rJMSF018M18  
  90    ------------------------------>JMSF050K02                                                                     
                                                                 <--------------------------------------rJMSF050K02  
 107    ---------------------------------->JMSF029K13                                                                 
                                                                 <-------------------------------------rJMSF029K13  
 109    ------------------------------>JMSF024J22                                                                     
                                                               <--------------------------------------rJMSF024J22  
 131    ------------------------------------------>JMSF044C03                                                         
                                                                 <-----------------------------------rJMSF044C03  
 134     ---------------------------------->JMFF045H20                                                                
                                                                         <----------------------------rJMFF045H20  
 152   -------------------------------->JMSF032E24                                                                    
                                                               <-----------------------------------rJMSF032E24  
 262         ------------------------------------>JMSF040J21                                                          
                                                     <---------------------------------------------rJMSF040J21  

The following clones don't have the opposite end in this pair.

                                             -------------------------------->JMFN046B20-                             
         ---------------------------------->JMFS126A11-