clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001M10 | Sequence | 461 | 002498 (5) | emb|CDP13862.1| | 6e-50 | unnamed protein product [Coffea canephora] | 724 | 002498 (5) | ref|XP_009599437.1| | 3e-89 | PREDICTED: superoxide dismutase [Fe], chloroplastic isoform X2 [Nicotiana tomen |
JMSF043C19 | Sequence | 647 | 002498 (5) | ref|XP_009773810.1| | 7e-80 | PREDICTED: superoxide dismutase [Fe], chloroplastic [Nicotiana sylvestris] | 807 | 002498 (5) | ref|XP_009773810.1| | 2e-125 | PREDICTED: superoxide dismutase [Fe], chloroplastic [Nicotiana sylvestris] |
JMSF044C19 | Sequence | 787 | 002498 (5) | ref|XP_009773810.1| | 3e-117 | PREDICTED: superoxide dismutase [Fe], chloroplastic [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002498============================================1066 1 ------------------------------------------>JMFF001M10 <-------------------------------------------------------------------rJMFF001M10 414 ----------------------------------------->JMSF043C19 <----------------------------------------------------------rJMSF043C19
The following clones don't have the opposite end in this pair.
<---------------------------------------------------------rJMSF044C19-