clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF030I16 | Sequence | 604 | 010312 (13) | ref|XP_009599766.1| | 3e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | 715 | 010312 (13) | ref|XP_009599766.1| | 2e-67 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] |
JMFF046E02 | Sequence | 604 | 010312 (13) | ref|XP_009599766.1| | 6e-77 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | 469 | 010312 (13) | ref|XP_009599766.1| | 6e-17 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] |
JMFN009N24 | Sequence | 593 | 010312 (13) | ref|XP_009599766.1| | 9e-77 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | |||||
JMFN016N14 | Sequence | 595 | 010312 (13) | ref|XP_009599766.1| | 1e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | |||||
JMFN033D03 | Sequence | 612 | 010312 (13) | ref|XP_009599766.1| | 1e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | |||||
JMFN039I17 | Sequence | 610 | 010312 (13) | ref|XP_009599766.1| | 2e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | |||||
JMFN041H06 | Sequence | 638 | 010312 (13) | ref|XP_009599766.1| | 1e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | |||||
JMFN045D13 | Sequence | 636 | 010312 (13) | ref|XP_009599766.1| | 1e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | |||||
JMFN045P01 | Sequence | 618 | 010312 (13) | ref|XP_009599766.1| | 1e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] | |||||
JMFS076H04 | Sequence | 657 | 010312 (13) | ref|XP_009599766.1| | 2e-76 | PREDICTED: PRA1 family protein F2-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010312============================================ 842 1 --------------------------------------------------------------------->JMFF046E02 <-------------------------------------------------------rJMFF046E02 41 ----------------------------------------------------------------------->JMFF030I16 <------------------------------------------------------------------------------------rJMFF030I16
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------>JMFN045P01- ----------------------------------------------------------------->JMSF028N11* --------------------------------------------------------------------------->JMFN041H06- ---------------------------------------------------------------------->JMFN016N14- ----------------------------------------------------------------------------->JMFS076H04- ------------------------------------------------------------------------>JMFN033D03- --------------------------------------------------------------------------->JMFN045D13- ----------------------------------------------------------------------->JMFN039I17- --------------------------------------------------------------------->JMFN009N24-