List of clones in pair P010844.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I06Sequence662010684 (31)ref|XP_004246325.1|2e-131PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFF012D02Sequence441010684 (31)ref|XP_004246325.1|6e-73PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop745010684 (31)ref|XP_004246325.1|1e-154PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFF022J05Sequence216010684 (31)ref|XP_006366348.1|1e-14PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Solanum 184010684 (31)ref|XP_004246325.1|3e-14PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN003D07Sequence606010684 (31)ref|XP_004246325.1|6e-119PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN003I12Sequence611010684 (31)ref|XP_004246325.1|1e-118PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN005L21Sequence642010684 (31)ref|XP_004246325.1|1e-149PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN011H17Sequence610010684 (31)ref|XP_004246325.1|4e-137PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN016K24Sequence605010684 (31)ref|XP_004246325.1|5e-116PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN034D07Sequence626010684 (31)ref|XP_004246325.1|1e-133PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN037E02Sequence556010684 (31)ref|XP_004246325.1|6e-104PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN037G16Sequence600010684 (31)ref|XP_004246325.1|6e-117PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN039E21Sequence573010684 (31)ref|XP_004246325.1|1e-108PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN041F06Sequence450010684 (31)ref|XP_004246325.1|8e-66PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFN041P13Sequence640010684 (31)ref|XP_004246325.1|2e-128PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFS073B04Sequence621010684 (31)ref|XP_004246325.1|7e-126PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMFS107H07Sequence485010684 (31)gb|KHN13315.1|6e-74Chlorophyll a-b binding protein CP29.2, chloroplastic [Glycine soja]
JMSF012J02Sequence473010684 (31)ref|XP_004246325.1|1e-79PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop694010684 (31)ref|XP_004246325.1|1e-151PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMSF012J16Sequence485010684 (31)ref|XP_004246325.1|9e-111PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop565010684 (31)ref|XP_004246325.1|1e-116PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMSF021O15Sequence676010684 (31)ref|XP_004246325.1|2e-126PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMSF024A14Sequence773010684 (31)ref|XP_004246325.1|1e-168PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMSF040O08Sequence642010684 (31)ref|XP_004246325.1|3e-117PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop210010684 (31)gb|ABK95186.1|2e-24unknown [Populus trichocarpa]
JMSF046A17Sequence640010684 (31)ref|XP_004246325.1|4e-118PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop712010684 (31)ref|XP_004246325.1|8e-150PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop
JMSF047G18Sequence677010684 (31)ref|XP_004246325.1|7e-145PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycop

Contig 10684 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010684============================================1031         
  67 ------------------------------------------------------------->JMSF046A17                                         
                              <--------------------------------------------------------------------rJMSF046A17  
  74   ------------------------------------------>JMFF012D02                                                          
                            <-----------------------------------------------------------------------rJMFF012D02  
 117   --------------------------------------------->JMSF012J02                                                       
                             <------------------------------------------------------------------rJMSF012J02  
 242 ------------------------------------------------------------->JMSF040O08                                         
                                                              <-------------------rJMSF040O08  
 467                                       ---------------------------------------------->JMSF012J16                  
                                           <------------------------------------------------------rJMSF012J16  
 865                                                                              ----------------->JMFF022J05        
                                                                                  <---------------rJMFF022J05

The following clones don't have the opposite end in this pair.

                                                             ------------------------------------------->JMFN041F06-  
                                          ---------------------------------------------------------->JMFN003I12-      
                                     <---------------------------------------------------------------rJMFF001I06-     
        ------------------------------------------------------->JMFN039E21-                                           
                        ------------------------------------------------------------->JMFN005L21-                     
     -------------------------------->JMSF002J05*                                                                     
        ---------------------------------------------------------->JMFN016K24-                                        
        ----------------------------------------------------->JMFN037E02-                                             
                      <--------------------------------------------------------------------------rJMSF024A14-         
         ---------------------------------------------------------->JMFN003D07-                                       
                               <---------------------------------------------------------------rJMSF047G18-           
                     ---------------------------------------------------------->JMFN011H17-                           
            ------------------------------------------------------------->JMFN041P13-                                 
           ----------------------------------------------------------->JMFS073B04-                                    
     ----------------------------------------------------------------->JMSF021O15-                                    
                                                       ---------------------------------------------->JMFS107H07-     
         --------------------------------------------------------->JMFN037G16-                                        
         ------------------------------>JMSF004M23*                                                                   
                                    ------------------------------------------------------------>JMFN034D07-