clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001N20 | Sequence | 171 | 011606 (14) | 271 | 011606 (14) | ||||||
JMFF018B12 | Sequence | 576 | 011606 (14) | emb|CDP01995.1| | 4e-64 | unnamed protein product [Coffea canephora] | 756 | 011606 (14) | emb|CDP01995.1| | 2e-92 | unnamed protein product [Coffea canephora] |
JMFF026D24 | Sequence | 572 | 011606 (14) | emb|CDP01995.1| | 1e-94 | unnamed protein product [Coffea canephora] | 764 | 011606 (14) | emb|CDP01995.1| | 3e-70 | unnamed protein product [Coffea canephora] |
JMFF035G06 | Sequence | 594 | 011606 (14) | emb|CDP01995.1| | 2e-64 | unnamed protein product [Coffea canephora] | 798 | 011606 (14) | emb|CDP01995.1| | 9e-58 | unnamed protein product [Coffea canephora] |
JMFF041F04 | Sequence | 652 | 011606 (14) | emb|CDP01995.1| | 9e-106 | unnamed protein product [Coffea canephora] | 512 | 011606 (14) | emb|CDP01995.1| | 8e-37 | unnamed protein product [Coffea canephora] |
JMFF041J07 | Sequence | 630 | 011606 (14) | emb|CDP01995.1| | 3e-107 | unnamed protein product [Coffea canephora] | |||||
JMFF044G17 | Sequence | 642 | 011606 (14) | emb|CDP01995.1| | 2e-114 | unnamed protein product [Coffea canephora] | 564 | 011606 (14) | |||
JMFS054E11 | Sequence | 627 | 011606 (14) | emb|CDP01995.1| | 3e-107 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011606============================================1419 42 ----------------------------------------->JMFF035G06 <-------------------------------------------------------rJMFF035G06 45 -------------------------------------------->JMFF044G17 <---------------------------------------rJMFF044G17 126 ----------->JMFF001N20 <------------------rJMFF001N20 128 --------------------------------------->JMFF026D24 <-----------------------------------------------------rJMFF026D24 209 --------------------------------------->JMFF018B12 <----------------------------------------------------rJMFF018B12 219 --------------------------------------------->JMFF041F04 <-----------------------------------rJMFF041F04
The following clones don't have the opposite end in this pair.
-------------------------------------------->JMFF041J07- ------------------------------------------->JMFS054E11-