clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009A08 | Sequence | 515 | 000094 (25) | ref|XP_011092274.1| | 9e-73 | PREDICTED: cytochrome c [Sesamum indicum] | 649 | 000094 (25) | ref|XP_011092274.1| | 6e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF011H15 | Sequence | 538 | 000094 (25) | ref|XP_011092274.1| | 1e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 640 | 000094 (25) | ref|XP_011092274.1| | 4e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF018J07 | Sequence | 544 | 000094 (25) | ref|XP_011092274.1| | 1e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 642 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF026P08 | Sequence | 576 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 690 | 000094 (25) | ref|XP_011092274.1| | 7e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF044L02 | Sequence | 651 | 000094 (25) | ref|XP_011092274.1| | 5e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 588 | 000094 (25) | gb|KJB77967.1| | 4e-64 | hypothetical protein B456_012G170200 [Gossypium raimondii] gb|KJB77969.1| hypoth |
JMFF045H16 | Sequence | 620 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 588 | 000094 (25) | gb|KJB77967.1| | 2e-65 | hypothetical protein B456_012G170200 [Gossypium raimondii] gb|KJB77969.1| hypoth |
JMFN008B01 | Sequence | 625 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN013N17 | Sequence | 159 | 000094 (25) | ref|XP_011092274.1| | 2e-13 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN014L20 | Sequence | 594 | 000094 (25) | gb|KJB77967.1| | 6e-67 | hypothetical protein B456_012G170200 [Gossypium raimondii] gb|KJB77969.1| hypoth | |||||
JMFN018D02 | Sequence | 625 | 000094 (25) | ref|XP_011092274.1| | 4e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN019O18 | Sequence | 589 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN028E08 | Sequence | 667 | 000094 (25) | ref|XP_011092274.1| | 4e-71 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN029I05 | Sequence | 590 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN029K10 | Sequence | 452 | 000094 (25) | ref|XP_011092274.1| | 4e-73 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN029M12 | Sequence | 589 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN035F02 | Sequence | 493 | 000094 (25) | ref|XP_011092274.1| | 6e-73 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN037E20 | Sequence | 612 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN038D23 | Sequence | 618 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN043L19 | Sequence | 561 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000094============================================ 701 11 --------------------------------------------------------------------------------->JMFF026P08 <-------------------------------------------------------------------------------------------------rJMFF026P08 11 --------------------------------------------------------------------------------------->JMFF045H16 <----------------------------------------------------------------------------------rJMFF045H16 14 -------------------------------------------------------------------------------------------->JMFF044L02 <--------------------------------------------------------------------------------rJMFF044L02 43 ------------------------------------------------------------------------>JMFF009A08 <--------------------------------------------------------------------------------------------rJMFF009A08 59 ----------------------------------------------------------------------------->JMFF018J07 <------------------------------------------------------------------------------------------rJMFF018J07 61 ---------------------------------------------------------------------------->JMFF011H15 <------------------------------------------------------------------------------------------rJMFF011H15
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------------------------------->JMFN038D23- <------------------------------------------------------------------------------------JMFN014L20- -------------------------------------------------------------------------------------->JMFN037E20- ----------------------------------------------------------------------------------->JMFN029I05- ---------------------->JMFN013N17- -------------------------------------------------------------->JMFN029K10- ----------------------------------------------------------------------------------->JMFN019O18- ------------------------------------------------------------------------------->JMFN043L19- ---------------------------------------------------------------------------------------->JMFN008B01- ---------------------------------------------------------------------------------------------->JMFN028E08- ---------------------------------------------------------------------------------------->JMFN018D02- ----------------------------------------------------------------------------------->JMFN029M12- --------------------------------------------------------------------->JMFN035F02-