clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF022I04 | Sequence | 480 | 013463 (19) | ref|XP_009795836.1| | 4e-47 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana sylvestris] ref|XP_0097958 | 733 | 013463 (19) | ref|XP_006359092.1| | 2e-08 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] |
JMFF022M18 | Sequence | 470 | 013463 (19) | ref|XP_009616692.1| | 3e-45 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana tomentosiformis] ref|XP_00 | 804 | 013463 (19) | ref|XP_006359092.1| | 2e-08 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] |
JMFF030O12 | Sequence | 348 | 013463 (19) | ref|XP_009616692.1| | 5e-17 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana tomentosiformis] ref|XP_00 | 642 | 013463 (19) | ref|XP_006359092.1| | 1e-08 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] |
JMFF044A24 | Sequence | 644 | 013463 (19) | ref|XP_009795836.1| | 8e-76 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana sylvestris] ref|XP_0097958 | 605 | 013463 (19) | ref|XP_006359092.1| | 1e-08 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] |
JMFF046P24 | Sequence | 471 | 013463 (19) | ref|XP_009616692.1| | 4e-45 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana tomentosiformis] ref|XP_00 | 458 | 013463 (19) | ref|XP_006359092.1| | 3e-09 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] |
JMFF047F23 | Sequence | 619 | 013463 (19) | ref|XP_009616692.1| | 4e-77 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana tomentosiformis] ref|XP_00 | 412 | 013463 (19) | ref|XP_006359092.1| | 8e-16 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] |
JMFS169H07 | Sequence | 605 | 013463 (19) | ref|XP_009795836.1| | 7e-60 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana sylvestris] ref|XP_0097958 | |||||
JMSF011N17 | Sequence | 263 | 013463 (19) | 732 | 013463 (19) | ref|XP_006359092.1| | 8e-09 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] | |||
JMSF036A06 | Sequence | 682 | 013463 (19) | ref|XP_009795836.1| | 2e-80 | PREDICTED: UBP1-associated protein 2C-like [Nicotiana sylvestris] ref|XP_0097958 | 746 | 013463 (19) | ref|XP_006359092.1| | 2e-08 | PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013463============================================1726 7 --------------------------------------->JMSF036A06 <------------------------------------------rJMSF036A06 10 -------------------------->JMFF046P24 <--------------------------rJMFF046P24 13 ----------------------------------->JMFF047F23 <-----------------------rJMFF047F23 34 ------------------->JMFF030O12 <------------------------------------rJMFF030O12 60 -------------->JMSF011N17 <-----------------------------------------rJMSF011N17 204 -------------------------->JMFF022M18 <---------------------------------rJMFF022M18 204 --------------------------->JMFF022I04 <------------------------------rJMFF022I04 204 ----------------------------------->JMFF044A24 <--------------------rJMFF044A24
The following clones don't have the opposite end in this pair.
---------------------------------->JMFS169H07- ----------------------------------->JMFF049P09# ------------------------------------>JMSF026C13#