List of clones in pair P010541.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040P05Sequence546008664 (20)ref|XP_002533104.1|9e-51histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R653008664 (20)ref|XP_002533104.1|3e-50histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R
JMSF010G18Sequence391008664 (20)ref|XP_002533102.1|6e-31histone h2a, putative [Ricinus communis] gb|EEF29274.1| histone h2a, putative [R641008664 (20)ref|XP_003629797.1|8e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF010H18Sequence434008664 (20)ref|XP_002533104.1|1e-42histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R636008664 (20)ref|XP_003629797.1|1e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF014H14Sequence481008664 (20)ref|XP_009628436.1|3e-50PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]642008664 (20)ref|XP_003629797.1|2e-48Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF019I05Sequence547008664 (20)ref|XP_003629797.1|5e-50Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med633008664 (20)ref|XP_003629797.1|1e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF047E24Sequence546008664 (20)ref|XP_003629797.1|5e-50Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med639008664 (20)ref|XP_003629797.1|1e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF048A19Sequence605008664 (20)ref|XP_003629797.1|1e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med570008664 (20)ref|XP_003629797.1|6e-50Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF048L08Sequence701008664 (20)ref|XP_003629797.1|3e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med724008664 (20)ref|XP_003629797.1|4e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF049B16Sequence674008664 (20)ref|XP_003629797.1|2e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med
JMSF049E24Sequence597008664 (20)ref|XP_009628436.1|4e-48PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]562008664 (20)ref|XP_009628436.1|1e-42PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]
JMSF050C17Sequence693008664 (20)ref|XP_003629797.1|3e-49Histone H2A [Medicago truncatula] gb|AET04273.1| core histone H2A/H2B/H3/H4 [Med

Contig 8664 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008664============================================ 729         
   1 ----------------------------------------------------------------->JMSF048L08                                     
     <---------------------------------------------------------------------------------------------------rJMSF048L08  
  73  -------------------------------------------------------------------------->JMFF040P05                           
      <-----------------------------------------------------------------------------------------rJMFF040P05  
  86  -------------------------------------------------------------------------->JMSF047E24                           
      <---------------------------------------------------------------------------------------rJMSF047E24  
  88 ----------------------------------------------------->JMSF010G18                                                 
     <---------------------------------------------------------------------------------------rJMSF010G18  
  89 ----------------------------------------------------------->JMSF010H18                                           
     <---------------------------------------------------------------------------------------rJMSF010H18  
  89 ----------------------------------------------------------------->JMSF014H14                                     
     <---------------------------------------------------------------------------------------rJMSF014H14  
  91  ---------------------------------------------------------------------------------->JMSF048A19                   
               <------------------------------------------------------------------------------rJMSF048A19  
  92  -------------------------------------------------------------------------->JMSF019I05                           
      <--------------------------------------------------------------------------------------rJMSF019I05  
 197  --------------------------------------------------------------------------------->JMSF049E24                    
        <----------------------------------------------------------------------rJMSF049E24

The following clones don't have the opposite end in this pair.

     ---------------------------------------------------------------->JMSF050C17-                                     
      -------------------------------------------------------------------------------------------->JMSF049B16-