clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002B10 | Sequence | 511 | 003139 (29) | ref|XP_004230291.1| | 267 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 742 | 003139 (29) | ref|XP_009593712.1| | 8e-84 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana tomentosiformis] |
JMFF003C01 | Sequence | 537 | 003139 (29) | ref|XP_004230291.1| | 278 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 717 | 003139 (29) | ref|XP_009593712.1| | 1e-77 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana tomentosiformis] |
JMFF015E12 | Sequence | 508 | 003139 (29) | ref|XP_004230291.1| | 265 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 719 | 003139 (29) | ref|XP_009593712.1| | 4e-79 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana tomentosiformis] |
JMFF017F08 | Sequence | 585 | 003139 (29) | ref|XP_004230291.1| | 291 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 700 | 003139 (29) | ref|XP_009757547.1| | 5e-73 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] |
JMFF017G22 | Sequence | 561 | 003139 (29) | ref|XP_004230291.1| | 293 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 772 | 003139 (29) | ref|XP_009757547.1| | 1e-83 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] |
JMFF027A11 | Sequence | 523 | 003139 (29) | ref|XP_004230291.1| | 283 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 724 | 003139 (29) | ref|XP_009593712.1| | 6e-78 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana tomentosiformis] |
JMFF029C13 | Sequence | 494 | 003139 (29) | ref|XP_004230291.1| | 267 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 767 | 003139 (29) | ref|XP_009593712.1| | 1e-84 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana tomentosiformis] |
JMFF033B20 | Sequence | 513 | 003139 (29) | ref|XP_004230291.1| | 267 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 744 | 003139 (29) | ref|XP_009757547.1| | 6e-106 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] |
JMFF035G02 | Sequence | 508 | 003139 (29) | ref|XP_004230291.1| | 267 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 756 | 003139 (29) | ref|XP_009757547.1| | 1e-83 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] |
JMFF038A05 | Sequence | 579 | 003139 (29) | ref|XP_004230291.1| | 290 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 763 | 003139 (29) | ref|XP_009757547.1| | 1e-82 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] |
JMFF040A21 | Sequence | 732 | 003139 (29) | ref|XP_009593712.1| | 1e-77 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana tomentosiformis] | |||||
JMFF044A10 | Sequence | 629 | 003139 (29) | ref|XP_004230291.1| | 338 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 658 | 003139 (29) | ref|XP_009757547.1| | 5e-47 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] |
JMFF046P06 | Sequence | 485 | 003139 (29) | ref|XP_009757547.1| | 1e-74 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] | 243 | 003139 (29) | |||
JMFF050A12 | Sequence | 583 | 003139 (29) | ref|XP_004230291.1| | 303 | PREDICTED: protein disulfide-isomerase like 2-1 [Solanum lycopersicum] | 609 | 003139 (29) | ref|XP_009757547.1| | 3e-47 | PREDICTED: probable protein disulfide-isomerase A6 [Nicotiana sylvestris] |
JMFS051A11 | Sequence | 476 | 003139 (29) | ref|XP_002282603.1| | 1e-66 | PREDICTED: probable protein disulfide-isomerase A6 [Vitis vinifera] emb|CBI39577 | |||||
JMFS111G02 | Sequence | 627 | 003139 (29) | emb|CDP18230.1| | 2e-118 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003139============================================1474 29 ----------------------------------------->JMFF044A10 <--------------------------------------------rJMFF044A10 51 -------------------------------->JMFF046P06 <---------------rJMFF046P06 67 --------------------------------------->JMFF017F08 <----------------------------------------------rJMFF017F08 75 -------------------------------------->JMFF038A05 <--------------------------------------------------rJMFF038A05 77 -------------------------------------->JMFF050A12 <----------------------------------------rJMFF050A12 78 ------------------------------------->JMFF017G22 <---------------------------------------------------rJMFF017G22 106 --------------------------------->JMFF035G02 <--------------------------------------------------rJMFF035G02 108 --------------------------------->JMFF015E12 <------------------------------------------------rJMFF015E12 108 ---------------------------------->JMFF002B10 <-------------------------------------------------rJMFF002B10 111 ----------------------------------->JMFF003C01 <-----------------------------------------------rJMFF003C01 117 --------------------------------->JMFF029C13 <--------------------------------------------------rJMFF029C13 117 ---------------------------------->JMFF027A11 <------------------------------------------------rJMFF027A11 193 ---------------------------------->JMFF033B20 <-------------------------------------------------rJMFF033B20
The following clones don't have the opposite end in this pair.
------------------------------------------>JMFS111G02- -------------------->JMFS051A11- <------------------------------------------------rJMFF040A21-