clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF019M06 | Sequence | 576 | 005272 (7) | ref|XP_009353946.1| | 9e-64 | PREDICTED: phosphatase IMPL1, chloroplastic-like [Pyrus x bretschneideri] ref|XP | 703 | 005272 (7) | gb|KDP23150.1| | 3e-89 | hypothetical protein JCGZ_00142 [Jatropha curcas] |
JMFN032I04 | Sequence | 640 | 005272 (7) | ref|XP_009353946.1| | 4e-81 | PREDICTED: phosphatase IMPL1, chloroplastic-like [Pyrus x bretschneideri] ref|XP | |||||
JMFN033P08 | Sequence | 596 | 005272 (7) | gb|KDP23150.1| | 3e-53 | hypothetical protein JCGZ_00142 [Jatropha curcas] | |||||
JMFN042M20 | Sequence | 607 | 005272 (7) | ref|XP_009590605.1| | 3e-106 | PREDICTED: phosphatase IMPL1, chloroplastic isoform X2 [Nicotiana tomentosiform | |||||
JMSF045G11 | Sequence | 765 | 005272 (7) | ref|XP_009353946.1| | 1e-99 | PREDICTED: phosphatase IMPL1, chloroplastic-like [Pyrus x bretschneideri] ref|XP | 830 | 005272 (7) | emb|CDP11230.1| | 7e-108 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005272============================================1476 45 --------------------------------------------------->JMSF045G11 <-------------------------------------------------------rJMSF045G11 85 -------------------------------------->JMFF019M06 <-----------------------------------------------rJMFF019M06
The following clones don't have the opposite end in this pair.
------------------------------------------>JMFN032I04- ---------------------------------------->JMFN042M20- <---------------------------------------JMFN033P08-