clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002B03 | Sequence | 613 | 012230 (10) | ref|XP_004228627.1| | 3e-51 | PREDICTED: uncharacterized oxidoreductase C26H5.09c [Solanum lycopersicum] | |||||
JMFF003I16 | Sequence | 588 | 012230 (10) | ref|XP_009588958.1| | 1e-73 | PREDICTED: uncharacterized protein YMR315W [Nicotiana tomentosiformis] | 766 | 012230 (10) | ref|XP_009773348.1| | 313 | PREDICTED: uncharacterized protein LOC104223588 [Nicotiana sylvestris] |
JMFF005L13 | Sequence | 699 | 012230 (10) | ref|XP_009773348.1| | 283 | PREDICTED: uncharacterized protein LOC104223588 [Nicotiana sylvestris] | |||||
JMFF030B12 | Sequence | 586 | 012230 (10) | ref|XP_009588958.1| | 3e-72 | PREDICTED: uncharacterized protein YMR315W [Nicotiana tomentosiformis] | 617 | 012230 (10) | ref|XP_009773348.1| | 285 | PREDICTED: uncharacterized protein LOC104223588 [Nicotiana sylvestris] |
JMSF022O21 | Sequence | 660 | 012230 (10) | ref|XP_004228627.1| | 2e-65 | PREDICTED: uncharacterized oxidoreductase C26H5.09c [Solanum lycopersicum] | 769 | 012230 (10) | ref|XP_006348416.1| | 240 | PREDICTED: uncharacterized protein YMR315W-like [Solanum tuberosum] |
JMSF024B21 | Sequence | 565 | 012230 (10) | ref|XP_004228627.1| | 1e-54 | PREDICTED: uncharacterized oxidoreductase C26H5.09c [Solanum lycopersicum] | 800 | 012230 (10) | ref|XP_004228627.1| | 1e-124 | PREDICTED: uncharacterized oxidoreductase C26H5.09c [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012230============================================1371 95 ---------------------------------------->JMSF024B21 <---------------------------------------------------------rJMSF024B21 119 ----------------------------------------------->JMSF022O21 <-------------------------------------------------------rJMSF022O21 133 ------------------------------------------>JMFF003I16 <------------------------------------------------------rJMFF003I16 141 ------------------------------------------>JMFF030B12 <--------------------------------------------rJMFF030B12
The following clones don't have the opposite end in this pair.
<--------------------------------------------------rJMFF005L13- -------------------------------------------->JMFF002B03-