clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004I23 | Sequence | 540 | 011382 (29) | ref|XP_009622218.1| | 2e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | 624 | 011382 (29) | ref|XP_009622218.1| | 6e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] |
JMFN003F23 | Sequence | 612 | 011382 (29) | ref|XP_009622218.1| | 1e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN008P18 | Sequence | 611 | 011382 (29) | ref|XP_009622218.1| | 6e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN015G23 | Sequence | 619 | 011382 (29) | ref|XP_009622218.1| | 8e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN015O14 | Sequence | 626 | 011382 (29) | ref|XP_009622218.1| | 7e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN017P20 | Sequence | 588 | 011382 (29) | ref|XP_009622218.1| | 2e-60 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN028A06 | Sequence | 421 | 011382 (29) | ref|XP_009622218.1| | 1e-28 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN031E18 | Sequence | 614 | 011382 (29) | ref|XP_009622218.1| | 6e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN032M20 | Sequence | 632 | 011382 (29) | ref|XP_009622218.1| | 8e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN037A14 | Sequence | 605 | 011382 (29) | ref|XP_009622218.1| | 7e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN041B11 | Sequence | 637 | 011382 (29) | ref|XP_009622218.1| | 8e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN046C05 | Sequence | 424 | 011382 (29) | ref|XP_009622218.1| | 3e-34 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFS086C04 | Sequence | 350 | 011382 (29) | ||||||||
JMSF009M17 | Sequence | 341 | 011382 (29) | ref|XP_009764546.1| | 2e-26 | PREDICTED: protein DOWNSTREAM OF FLC-like [Nicotiana sylvestris] | |||||
JMSF026B16 | Sequence | 702 | 011382 (29) | ref|XP_009622218.1| | 2e-57 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | 652 | 011382 (29) | ref|XP_009622218.1| | 8e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011382============================================1538 886 ------------------------------------------->JMSF026B16 <-----------------------------------------rJMSF026B16 913 ---------------------------------->JMFF004I23 <----------------------------------------rJMFF004I23
The following clones don't have the opposite end in this pair.
<---------------------------------------------rJMFF010J14* ----------------------------------------->JMSF038F08* --------------------->JMSF009M17- <-------------------------------------rJMFF026J07* ---------------------------------------->JMFN041B11- -------------------------->JMFN028A06- ---------------------------------------->JMFN015O14- --------------------------------------->JMFN031E18- <---------------------------------------rJMFF001M09* --------------------------------------->JMFN003F23- <-----------------------------------------------rJMSF038J21* <-----------------------------rJMFF050K13* <-------------------------------------------rJMSF012K01* <------------------------------rJMSF041E09* <-------------------------------------------rJMFF035I18* ------------------------------------>JMFN017P20- <-----------------------------------------------------------rJMSF038K17* <--------------------------------------rJMFF041N08* --------------------------------------->JMFN015G23- <------------------------JMFN046C05- -------------------------------------->JMFN037A14- ---------------------->JMFS086C04- <------------------------------------------rJMSF023J18* ---------------------------------------->JMFN032M20- --------------------------------------->JMFN008P18-