clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF022H17 | Sequence | 479 | 003321 (9) | gb|KJB11518.1| | 3e-85 | hypothetical protein B456_001G263300 [Gossypium raimondii] | 712 | 003321 (9) | gb|KJB11518.1| | 5e-131 | hypothetical protein B456_001G263300 [Gossypium raimondii] |
JMFN010P15 | Sequence | 642 | 003321 (9) | gb|KJB11518.1| | 4e-131 | hypothetical protein B456_001G263300 [Gossypium raimondii] | |||||
JMFN016O22 | Sequence | 628 | 003321 (9) | gb|KJB11518.1| | 6e-128 | hypothetical protein B456_001G263300 [Gossypium raimondii] | |||||
JMFN025L19 | Sequence | 424 | 003321 (9) | gb|KJB11518.1| | 4e-84 | hypothetical protein B456_001G263300 [Gossypium raimondii] | |||||
JMFN030E17 | Sequence | 480 | 003321 (9) | gb|AGV54515.1| | 5e-70 | ADP ribosylation factor [Phaseolus vulgaris] | |||||
JMSF033P04 | Sequence | 699 | 003321 (9) | gb|KJB11518.1| | 2e-130 | hypothetical protein B456_001G263300 [Gossypium raimondii] | 692 | 003321 (9) | ref|XP_008777957.1| | 3e-128 | PREDICTED: ADP-ribosylation factor [Phoenix dactylifera] ref|XP_008777958.1| PRE |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003321============================================ 768 102 ------------------------------------------------>JMFF022H17 <-----------------------------------------------------------------------------------------rJMFF022H17 214 ----------------------------------------------------------------------------->JMSF033P04 <----------------------------------------------------------------------rJMSF033P04
The following clones don't have the opposite end in this pair.
---------------------------------------->JMFN030E17- ------------------------------------------------------>JMFN025L19- -------------------------------------------------------------------->JMFN016O22- <--------------------------rJMSF018I07* ----------------------------------------------------------------------------------->JMFN010P15-