| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF044F15 | Sequence | 639 | 012478 (8) | ref|XP_004245638.1| | 8e-118 | PREDICTED: replication factor C subunit 2 [Solanum lycopersicum] | 609 | 012478 (8) | ref|XP_009769681.1| | 9e-49 | PREDICTED: replication factor C subunit 2 [Nicotiana sylvestris] |
| JMFF050B20 | Sequence | 625 | 012478 (8) | ref|XP_004245638.1| | 1e-116 | PREDICTED: replication factor C subunit 2 [Solanum lycopersicum] | 562 | 012478 (8) | emb|CAA06481.1| | 2e-27 | replication factor C/activator 1 subunit [Cicer arietinum] |
| JMSF009A05 | Sequence | 274 | 012478 (8) | emb|CDP09794.1| | 3e-43 | unnamed protein product [Coffea canephora] | 788 | 012478 (8) | ref|XP_009621420.1| | 1e-137 | PREDICTED: replication factor C subunit 2 [Nicotiana tomentosiformis] |
| JMSF039B15 | Sequence | 660 | 012478 (8) | ref|XP_009621420.1| | 1e-120 | PREDICTED: replication factor C subunit 2 [Nicotiana tomentosiformis] | 899 | 012478 (8) | ref|XP_009621420.1| | 5e-151 | PREDICTED: replication factor C subunit 2 [Nicotiana tomentosiformis] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig012478============================================1442 25 ------------------------------------------>JMFF050B20 <--------------------------------------rJMFF050B20 66 ------------------------------------------>JMFF044F15 <-----------------------------------------rJMFF044F15 205 -------------------------------------------->JMSF039B15 <------------------------------------------------------------rJMSF039B15 294 ------------------>JMSF009A05 <-----------------------------------------------------rJMSF009A05
The following clones don't have the opposite end in this pair.