clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001A04 | Sequence | 532 | 005386 (22) | ref|XP_006604532.1| | 4e-49 | PREDICTED: histone H4-like [Glycine max] | 498 | 005386 (22) | ref|XP_006604532.1| | 3e-49 | PREDICTED: histone H4-like [Glycine max] |
JMFF016M09 | Sequence | 530 | 005386 (22) | gb|KJB18225.1| | 4e-46 | hypothetical protein B456_003G040200 [Gossypium raimondii] | 507 | 005386 (22) | gb|KJB18225.1| | 3e-46 | hypothetical protein B456_003G040200 [Gossypium raimondii] |
JMFF018L09 | Sequence | 526 | 005386 (22) | gb|KJB18225.1| | 4e-46 | hypothetical protein B456_003G040200 [Gossypium raimondii] | 505 | 005386 (22) | gb|KJB18225.1| | 3e-46 | hypothetical protein B456_003G040200 [Gossypium raimondii] |
JMFF036K03 | Sequence | 534 | 005386 (22) | ref|XP_006604532.1| | 4e-49 | PREDICTED: histone H4-like [Glycine max] | 511 | 005386 (22) | ref|XP_006604532.1| | 3e-49 | PREDICTED: histone H4-like [Glycine max] |
JMFF048O06 | Sequence | 330 | 005386 (22) | gb|KJB18225.1| | 2e-41 | hypothetical protein B456_003G040200 [Gossypium raimondii] | 221 | 005386 (22) | |||
JMFN007I14 | Sequence | 503 | 005386 (22) | gb|KJB18225.1| | 3e-46 | hypothetical protein B456_003G040200 [Gossypium raimondii] | |||||
JMFN016C23 | Sequence | 512 | 005386 (22) | gb|EMT31824.1| | 3e-49 | Histone H4 [Aegilops tauschii] | |||||
JMFN020K24 | Sequence | 497 | 005386 (22) | gb|AFW80115.1| | 5e-49 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMFN025D21 | Sequence | 348 | 005386 (22) | gb|AFW80115.1| | 3e-50 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMFN030I15 | Sequence | 496 | 005386 (22) | gb|AFW80115.1| | 2e-49 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMFN032D01 | Sequence | 508 | 005386 (22) | ref|XP_006604532.1| | 3e-49 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN034D13 | Sequence | 524 | 005386 (22) | ref|XP_007179126.1| | 1e-07 | PREDICTED: histone H3.1-like isoform X1 [Balaenoptera acutorostrata scammoni] | |||||
JMFN035E23 | Sequence | 512 | 005386 (22) | gb|EMT31824.1| | 3e-49 | Histone H4 [Aegilops tauschii] | |||||
JMFN037A05 | Sequence | 494 | 005386 (22) | gb|AFW80115.1| | 1e-49 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMFN042H21 | Sequence | 474 | 005386 (22) | gb|AFW80115.1| | 1e-45 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMFN044J05 | Sequence | 510 | 005386 (22) | gb|AFW80115.1| | 1e-49 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMFS025D02 | Sequence | 487 | 005386 (22) | gb|EMT31824.1| | 2e-49 | Histone H4 [Aegilops tauschii] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005386============================================ 538 15 ------------------------------------------------------------->JMFF048O06 <-----------------------------------------rJMFF048O06 23 --------------------------------------------------------------------------------------------------->JMFF016M09 <-----------------------------------------------------------------------------------------------rJMFF016M09 24 --------------------------------------------------------------------------------------------------->JMFF036K03 <-----------------------------------------------------------------------------------------------rJMFF036K03 37 ------------------------------------------------------------------------------------------------>JMFF018L09 <--------------------------------------------------------------------------------------------rJMFF018L09 44 -------------------------------------------------------------------------------------------------->JMFF001A04 <-------------------------------------------------------------------------------------------rJMFF001A04
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------------------->JMFN020K24- ---------------------------------------------------------------------------------------------->JMFN032D01- ---------------------------------------------------------------------------------------------->JMFN007I14- ---------------------------------------------------------------------------------------------->JMFN044J05- -------------------------------------------------------------------------------------------->JMFN030I15- ------------------------------------------------------------------------------------------->JMFN037A05- ------------------------------------------------------------------------------------------>JMFS025D02- ---------------------------------------------------------------->JMFN025D21- ------------------------------------------------------------------------------------------>JMFN035E23- ------------------------------------------------------------------------------------------>JMFN016C23- ----------------------------------------------------------------------------------------->JMFN042H21- --------------------------------------------------------------------->JMFN034D13-