| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001A08 | Sequence | 572 | 008700 (17) | ref|XP_011069394.1| | 2e-105 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] | 778 | 008700 (17) | ref|XP_011069394.1| | 6e-132 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] |
| JMFF008P06 | Sequence | 552 | 008700 (17) | ref|XP_011069394.1| | 2e-106 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] | 778 | 008700 (17) | ref|XP_011069394.1| | 6e-137 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] |
| JMFF017N03 | Sequence | 688 | 008700 (17) | ref|XP_003608106.1| | 1e-81 | Proteasome subunit beta type [Medicago truncatula] gb|AES90303.1| proteasome bet | |||||
| JMFF034N10 | Sequence | 582 | 008700 (17) | ref|XP_010063943.1| | 4e-113 | PREDICTED: proteasome subunit beta type-3-A [Eucalyptus grandis] | 712 | 008700 (17) | ref|XP_011069394.1| | 2e-118 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] |
| JMFN008O05 | Sequence | 642 | 008700 (17) | ref|XP_011069394.1| | 1e-141 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] | |||||
| JMFN010M05 | Sequence | 534 | 008700 (17) | gb|AEC11048.1| | 4e-68 | 20S proteasome beta subunit pbc2, partial [Camellia sinensis] | |||||
| JMFN016K19 | Sequence | 622 | 008700 (17) | emb|CDP10945.1| | 6e-132 | unnamed protein product [Coffea canephora] | |||||
| JMFN028N01 | Sequence | 458 | 008700 (17) | ref|XP_010095417.1| | 3e-26 | Proteasome subunit beta type-3-A [Morus notabilis] gb|EXB60109.1| Proteasome sub | |||||
| JMFN029G14 | Sequence | 636 | 008700 (17) | ref|XP_011069394.1| | 5e-140 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] | |||||
| JMFN036A15 | Sequence | 626 | 008700 (17) | ref|XP_011069394.1| | 1e-134 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] | |||||
| JMFN038N13 | Sequence | 644 | 008700 (17) | ref|XP_011069394.1| | 4e-139 | PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] | |||||
| JMFN038O01 | Sequence | 601 | 008700 (17) | emb|CDP10945.1| | 1e-130 | unnamed protein product [Coffea canephora] | |||||
| JMFN038O17 | Sequence | 448 | 008700 (17) | ref|XP_008466779.1| | 5e-44 | PREDICTED: proteasome subunit beta type-3-A [Cucumis melo] | |||||
| JMFN042J20 | Sequence | 477 | 008700 (17) | gb|AFW76219.1| | 2e-28 | hypothetical protein ZEAMMB73_756098 [Zea mays] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig008700============================================ 941 22 ------------------------------------------------------------>JMFF001A08 <----------------------------------------------------------------------------------rJMFF001A08 61 ------------------------------------------------------------->JMFF034N10 <---------------------------------------------------------------------------rJMFF034N10 67 ---------------------------------------------------------->JMFF008P06 <----------------------------------------------------------------------------------rJMFF008P06
The following clones don't have the opposite end in this pair.
-------------------->JMFN028N01- -------------------------------------------------------------->JMFN038O01- -------------------------------------------------------------------->JMFN038N13- ------------------------------------------------------------------->JMFN029G14- <------------------------------------------------------------------------rJMFF017N03- ------------------------------------------------------------------>JMFN036A15- -------------------------------------------------------------------->JMFN008O05- -------------------------------------------------------->JMFN010M05- ----------------------------------------------------------------->JMFN016K19- ----------------------------------------------->JMFN038O17- ------------------------------------------------>JMFN042J20-