clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004D15 | Sequence | 468 | 000769 (15) | ref|NP_001237389.1| | 1e-85 | uncharacterized protein LOC100527275 [Glycine max] gb|ACU16334.1| unknown [Glyci | 581 | 000769 (15) | emb|CDP17103.1| | 2e-77 | unnamed protein product [Coffea canephora] |
JMFF006P01 | Sequence | 481 | 000769 (15) | ref|NP_001237389.1| | 1e-87 | uncharacterized protein LOC100527275 [Glycine max] gb|ACU16334.1| unknown [Glyci | 775 | 000769 (15) | ref|XP_004489107.1| | 6e-113 | PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum] |
JMFF016A22 | Sequence | 515 | 000769 (15) | ref|NP_001237389.1| | 7e-98 | uncharacterized protein LOC100527275 [Glycine max] gb|ACU16334.1| unknown [Glyci | 771 | 000769 (15) | ref|XP_004489107.1| | 6e-110 | PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum] |
JMSF006K17 | Sequence | 410 | 000769 (15) | gb|KDO71767.1| | 3e-70 | hypothetical protein CISIN_1g028783mg [Citrus sinensis] | |||||
JMSF016F15 | Sequence | 508 | 000769 (15) | ref|NP_001237389.1| | 2e-92 | uncharacterized protein LOC100527275 [Glycine max] gb|ACU16334.1| unknown [Glyci | 757 | 000769 (15) | ref|XP_004489107.1| | 3e-113 | PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum] |
JMSF024B15 | Sequence | 642 | 000769 (15) | ref|XP_004489107.1| | 6e-114 | PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum] | 779 | 000769 (15) | ref|XP_004136019.1| | 6e-113 | PREDICTED: 60S ribosomal protein L19-2-like [Cucumis sativus] ref|XP_004167635.1 |
JMSF025P02 | Sequence | 585 | 000769 (15) | ref|XP_004489107.1| | 4e-111 | PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum] | 748 | 000769 (15) | ref|XP_004136019.1| | 3e-112 | PREDICTED: 60S ribosomal protein L19-2-like [Cucumis sativus] ref|XP_004167635.1 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000769============================================ 804 5 ------------------------------------------------------------------------------->JMSF024B15 <------------------------------------------------------------------------------------------------rJMSF024B15 8 ----------------------------------------------------------->JMFF006P01 <-----------------------------------------------------------------------------------------------rJMFF006P01 34 ----------------------------------------------------------------------->JMSF025P02 <--------------------------------------------------------------------------------------------rJMSF025P02 46 -------------------------------------------------------------->JMSF016F15 <---------------------------------------------------------------------------------------------rJMSF016F15 54 --------------------------------------------------------->JMFF004D15 <------------------------------------------------------------------------rJMFF004D15 206 --------------------------------------------------------------->JMFF016A22 <---------------------------------------------------------------------rJMFF016A22
The following clones don't have the opposite end in this pair.
------------------------------------------------------------->JMFF051G06# <-----------------------------------rJMSF006K19* -------------------------------------------------->JMSF006K17-