clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008A05 | Sequence | 549 | 006293 (15) | ref|XP_009764357.1| | 199 | PREDICTED: uncharacterized protein LOC104216094 [Nicotiana sylvestris] ref|XP_00 | 739 | 006293 (15) | gb|KJB32884.1| | 9e-63 | hypothetical protein B456_005G267600 [Gossypium raimondii] |
JMFF009E05 | Sequence | 576 | 006293 (15) | ref|XP_009764357.1| | 199 | PREDICTED: uncharacterized protein LOC104216094 [Nicotiana sylvestris] ref|XP_00 | 710 | 006293 (15) | gb|KJB32884.1| | 1e-64 | hypothetical protein B456_005G267600 [Gossypium raimondii] |
JMFF015A09 | Sequence | 552 | 006293 (15) | ref|XP_006356886.1| | 1e-62 | PREDICTED: uncharacterized protein LOC102605114 isoform X1 [Solanum tuberosum] | 688 | 006293 (15) | gb|KJB32884.1| | 2e-60 | hypothetical protein B456_005G267600 [Gossypium raimondii] |
JMFF028I19 | Sequence | 513 | 006293 (15) | ref|XP_009764357.1| | 147 | PREDICTED: uncharacterized protein LOC104216094 [Nicotiana sylvestris] ref|XP_00 | 667 | 006293 (15) | gb|KJB32884.1| | 7e-63 | hypothetical protein B456_005G267600 [Gossypium raimondii] |
JMFF042L12 | Sequence | 628 | 006293 (15) | ref|XP_006356886.1| | 2e-63 | PREDICTED: uncharacterized protein LOC102605114 isoform X1 [Solanum tuberosum] | 556 | 006293 (15) | gb|KJB32884.1| | 3e-58 | hypothetical protein B456_005G267600 [Gossypium raimondii] |
JMFF050P04 | Sequence | 626 | 006293 (15) | ref|XP_006356886.1| | 1e-62 | PREDICTED: uncharacterized protein LOC102605114 isoform X1 [Solanum tuberosum] | 592 | 006293 (15) | gb|KJB32884.1| | 5e-63 | hypothetical protein B456_005G267600 [Gossypium raimondii] |
JMFS121A06 | Sequence | 557 | 006293 (15) | ref|XP_011096819.1| | 122 | PREDICTED: uncharacterized protein LOC105175883 [Sesamum indicum] | |||||
JMSF004K22 | Sequence | 308 | 006293 (15) | ref|XP_009764357.1| | 133 | PREDICTED: uncharacterized protein LOC104216094 [Nicotiana sylvestris] ref|XP_00 | 445 | 006293 (15) | gb|KJB32884.1| | 2e-56 | hypothetical protein B456_005G267600 [Gossypium raimondii] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006293============================================1295 38 ------------------------------------------->JMFF009E05 <-----------------------------------------------------rJMFF009E05 38 ------------------------------------------>JMFF015A09 <---------------------------------------------------rJMFF015A09 120 ----------------------------------------->JMFF008A05 <--------------------------------------------------------rJMFF008A05 128 ----------------------------------------------->JMFF042L12 <------------------------------------------rJMFF042L12 134 ----------------------------------------------->JMFF050P04 <--------------------------------------------rJMFF050P04 265 ----------------------->JMSF004K22 <---------------------------------rJMSF004K22 286 --------------------------->JMFF028I19 <---------------------------------------------------rJMFF028I19
The following clones don't have the opposite end in this pair.
<------------------------------------------JMFS121A06-