List of clones in pair P010127.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F21Sequence612002081 (29)ref|XP_011022822.1|5e-105PREDICTED: 40S ribosomal protein S6 [Populus euphratica]664002081 (29)ref|XP_002285752.1|1e-74PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] emb|CBI19191.3| unnamed pro
JMFF006M04Sequence490002081 (29)ref|XP_011031062.1|7e-76PREDICTED: 40S ribosomal protein S6-like [Populus euphratica]804002081 (29)gb|KDP41410.1|7e-83hypothetical protein JCGZ_15817 [Jatropha curcas]
JMFF022G04Sequence476002081 (29)ref|XP_011031062.1|1e-71PREDICTED: 40S ribosomal protein S6-like [Populus euphratica]725002081 (29)ref|XP_002285752.1|5e-75PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] emb|CBI19191.3| unnamed pro
JMFF044E07Sequence636002081 (29)ref|XP_011022822.1|1e-118PREDICTED: 40S ribosomal protein S6 [Populus euphratica]604002081 (29)ref|XP_002285752.1|4e-72PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] emb|CBI19191.3| unnamed pro
JMFF044M13Sequence632002081 (29)ref|XP_011022822.1|6e-108PREDICTED: 40S ribosomal protein S6 [Populus euphratica]616002081 (29)ref|XP_002285752.1|4e-63PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] emb|CBI19191.3| unnamed pro
JMFF048L18Sequence344002081 (29)gb|KJB44105.1|1e-55hypothetical protein B456_007G234700 [Gossypium raimondii]535002081 (29)ref|XP_009780041.1|2e-10PREDICTED: 40S ribosomal protein S6 [Nicotiana sylvestris]
JMFN013K15Sequence625002081 (29)ref|XP_011022822.1|4e-113PREDICTED: 40S ribosomal protein S6 [Populus euphratica]
JMFN019B05Sequence610002081 (29)ref|XP_011022822.1|3e-113PREDICTED: 40S ribosomal protein S6 [Populus euphratica]
JMFS042E10Sequence615002081 (29)ref|XP_011022822.1|3e-113PREDICTED: 40S ribosomal protein S6 [Populus euphratica]
JMFS057C02Sequence615002081 (29)ref|XP_011022822.1|3e-113PREDICTED: 40S ribosomal protein S6 [Populus euphratica]
JMFS063H02Sequence620002081 (29)ref|XP_011022822.1|2e-107PREDICTED: 40S ribosomal protein S6 [Populus euphratica]
JMFS067H04Sequence626002081 (29)ref|XP_011022822.1|1e-114PREDICTED: 40S ribosomal protein S6 [Populus euphratica]
JMSF002I04Sequence217002081 (29)ref|XP_009780041.1|1e-21PREDICTED: 40S ribosomal protein S6 [Nicotiana sylvestris]779002081 (29)gb|KDP41410.1|3e-109hypothetical protein JCGZ_15817 [Jatropha curcas]
JMSF005E22Sequence419002081 (29)gb|KDP41410.1|8e-58hypothetical protein JCGZ_15817 [Jatropha curcas]
JMSF027G12Sequence651002081 (29)ref|XP_011022822.1|5e-114PREDICTED: 40S ribosomal protein S6 [Populus euphratica]798002081 (29)gb|KDP41410.1|6e-111hypothetical protein JCGZ_15817 [Jatropha curcas]
JMSF044F22Sequence743002081 (29)ref|XP_011022822.1|2e-113PREDICTED: 40S ribosomal protein S6 [Populus euphratica]803002081 (29)gb|KDP41410.1|2e-112hypothetical protein JCGZ_15817 [Jatropha curcas]
JMSF047H14Sequence654002081 (29)ref|XP_011022822.1|6e-114PREDICTED: 40S ribosomal protein S6 [Populus euphratica]783002081 (29)ref|XP_002285752.1|1e-89PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] emb|CBI19191.3| unnamed pro

Contig 2081 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002081============================================ 993         
   4 ------------------------------------------------>JMFF006M04                                                      
                        <--------------------------------------------------------------------------------rJMFF006M04  
  15  ---------------------------------------------------------------->JMSF027G12                                     
                        <-------------------------------------------------------------------------------rJMSF027G12  
  26 ----------------------------------------------->JMFF022G04                                                       
                                 <---------------------------------------------------------------------rJMFF022G04  
  27 --------------------->JMSF002I04                                                                                 
                        <------------------------------------------------------------------------------rJMSF002I04  
  27 -------------------------------------------------------------------------->JMSF044F22                            
                       <------------------------------------------------------------------------------rJMSF044F22  
  34  ------------------------------------------------------------->JMFF001F21                                        
                                       <---------------------------------------------------------------rJMFF001F21  
  45 ----------------------------------------------------------------->JMSF047H14                                     
                        <----------------------------------------------------------------------------rJMSF047H14  
 149 ---------------------------------->JMFF048L18                                                                    
                                                                  <-----------------------rJMFF048L18  
 149 --------------------------------------------------------------->JMFF044M13                                       
                                             <--------------------------------------------rJMFF044M13  
 184     --------------------------------------------------------------->JMFF044E07                                   
                                             <--------------------------------------------rJMFF044E07

The following clones don't have the opposite end in this pair.

     ----------------------------------------->JMSF005E22-                                                            
                                <--------------------------------------------------------------------rJMSF014B06*     
      -------------------------------------------------------------->JMFS063H02-                                      
         ------------------------------------------------------------->JMFN019B05-                                    
                           <--------------------------------------------------------------rJMFF012J24*                
        -------------------------------------------------------------->JMFS067H04-                                    
        -------------------------------------------------------------->JMFN013K15-                                    
         ------------------------------------------------------------->JMFS042E10-                                    
         ------------------------------------------------------------->JMFS057C02-