| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004O04 | Sequence | 583 | 013319 (28) | emb|CAB71293.1| | 4e-79 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 716 | 013319 (28) | ref|XP_003520228.1| | 2e-130 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMFF011H06 | Sequence | 564 | 013319 (28) | emb|CAB71293.1| | 1e-81 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 730 | 013319 (28) | ref|XP_003520228.1| | 3e-137 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMFF021A05 | Sequence | 570 | 013319 (28) | ref|XP_009390794.1| | 8e-56 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like [Musa a | 699 | 013319 (28) | ref|XP_003520228.1| | 1e-129 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMFF023C02 | Sequence | 717 | 013319 (28) | ref|XP_003520228.1| | 2e-137 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform | |||||
| JMFF035F01 | Sequence | 492 | 013319 (28) | ref|XP_003520228.1| | 1e-65 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform | 496 | 013319 (28) | ref|XP_003520228.1| | 2e-66 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMFF049G19 | Sequence | 313 | 013319 (28) | ||||||||
| JMFN015G04 | Sequence | 618 | 013319 (28) | ref|XP_009794242.1| | 1e-125 | PREDICTED: ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic [Nicoti | |||||
| JMFS090B05 | Sequence | 624 | 013319 (28) | ref|XP_004232495.1| | 6e-147 | PREDICTED: ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic [Solanu | |||||
| JMSF010L12 | Sequence | 296 | 013319 (28) | emb|CAB71293.1| | 6e-14 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 770 | 013319 (28) | ref|XP_003520228.1| | 9e-139 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMSF017I21 | Sequence | 235 | 013319 (28) | 803 | 013319 (28) | ref|XP_003520228.1| | 8e-157 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform | |||
| JMSF025J13 | Sequence | 679 | 013319 (28) | emb|CAB71293.1| | 4e-108 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 817 | 013319 (28) | ref|XP_003520228.1| | 1e-148 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMSF029E21 | Sequence | 585 | 013319 (28) | emb|CAB71293.1| | 1e-92 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 695 | 013319 (28) | ref|XP_003520228.1| | 2e-130 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMSF030L19 | Sequence | 682 | 013319 (28) | emb|CAB71293.1| | 4e-120 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 719 | 013319 (28) | ref|XP_003520228.1| | 2e-137 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMSF034L10 | Sequence | 645 | 013319 (28) | emb|CAB71293.1| | 7e-106 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 724 | 013319 (28) | ref|XP_003520228.1| | 1e-125 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
| JMSF036I13 | Sequence | 640 | 013319 (28) | emb|CAB71293.1| | 2e-108 | chloroplast ferredoxin-NADP+ oxidoreductase precursor [Capsicum annuum] | 768 | 013319 (28) | ref|XP_003520228.1| | 5e-148 | PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like isoform |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig013319============================================1517 52 -------------->JMSF017I21 <----------------------------------------------------rJMSF017I21 179 ------------------------------------------>JMSF034L10 <-----------------------------------------------rJMSF034L10 203 ------------------------------------>JMFF011H06 <-----------------------------------------------rJMFF011H06 211 ----------------------------------->JMFF004O04 <----------------------------------------------rJMFF004O04 216 -------------------------------------------->JMSF025J13 <-----------------------------------------------------rJMSF025J13 217 ------------------>JMSF010L12 <-----------------------------------------------rJMSF010L12 245 ------------------------------------->JMFF021A05 <---------------------------------------------rJMFF021A05 252 -------------------------------------->JMSF029E21 <---------------------------------------------rJMSF029E21 252 ----------------------------------------->JMSF036I13 <--------------------------------------------------rJMSF036I13 252 -------------------------------------------->JMSF030L19 <----------------------------------------------rJMSF030L19 1045 ------------------------------->JMFF035F01 <------------------------------rJMFF035F01
The following clones don't have the opposite end in this pair.
<-----------------------------------------rJMSF026J13* <----------------------------------------------rJMFF023C02- -------------------->JMFF049G19- --------------------------------------->JMSF029N23* ---------------------------------------->JMFS090B05- ---------------------------------------->JMFN015G04-