clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011G02 | Sequence | 421 | 000900 (17) | 757 | 000900 (17) | ref|XP_009625394.1| | 79.7 | PREDICTED: uncharacterized protein LOC104116273 [Nicotiana tomentosiformis] | |||
JMFN007P21 | Sequence | 296 | 000900 (17) | ||||||||
JMFN018J03 | Sequence | 611 | 000900 (17) | ref|XP_009769040.1| | 71.2 | PREDICTED: uncharacterized protein LOC104219970 [Nicotiana sylvestris] | |||||
JMFN030C04 | Sequence | 423 | 000900 (17) | ||||||||
JMFS109D04 | Sequence | 611 | 000900 (17) | ||||||||
JMFS150C11 | Sequence | 619 | 000900 (17) | ||||||||
JMSF001F15 | Sequence | 195 | 000900 (17) | emb|CDP06646.1| | 2e-04 | unnamed protein product [Coffea canephora] | 708 | 000900 (17) | ref|XP_006341060.1| | 197 | PREDICTED: uncharacterized protein LOC102586667 [Solanum tuberosum] |
JMSF022O13 | Sequence | 678 | 000900 (17) | 737 | 000900 (17) | ref|XP_006341060.1| | 200 | PREDICTED: uncharacterized protein LOC102586667 [Solanum tuberosum] | |||
JMSF045G13 | Sequence | 819 | 000900 (17) | 718 | 000900 (17) | ref|XP_006341060.1| | 195 | PREDICTED: uncharacterized protein LOC102586667 [Solanum tuberosum] | |||
JMSF046P10 | Sequence | 690 | 000900 (17) | 692 | 000900 (17) | ref|XP_009626974.1| | 196 | PREDICTED: uncharacterized protein LOC104117608 [Nicotiana tomentosiformis] ref| |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000900============================================2064 209 ------------------->JMFF011G02 <------------------------------------rJMFF011G02 394 -------------------------------------->JMSF045G13 <----------------------------------rJMSF045G13 398 -------------------------------->JMSF046P10 <-------------------------------rJMSF046P10 400 -------------------------------->JMSF022O13 <----------------------------------rJMSF022O13 1353 -------->JMSF001F15 <--------------------------------rJMSF001F15
The following clones don't have the opposite end in this pair.
------------------------------>JMSF040A18# ------------------------------>JMSF039H20* ----------------------------->JMFS109D04- ----------------------------->JMFS150C11- ------------->JMFN007P21- ----------------------------->JMFN018J03- ------------------->JMFN030C04-