clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF007D21 | Sequence | 497 | 001009 (27) | ref|XP_009760896.1| | 2e-45 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 669 | 001009 (27) | ref|XP_009760896.1| | 3e-107 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] |
JMFF011D10 | Sequence | 552 | 001009 (27) | ref|XP_009760896.1| | 1e-60 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 697 | 001009 (27) | ref|XP_009760896.1| | 7e-79 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] |
JMFF024A15 | Sequence | 491 | 001009 (27) | ref|XP_009760896.1| | 1e-44 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 546 | 001009 (27) | ref|XP_009606160.1| | 8e-20 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana tomentosiformis] |
JMFF030C19 | Sequence | 589 | 001009 (27) | ref|XP_004137161.1| | 216 | PREDICTED: uncharacterized protein LOC101213735 [Cucumis sativus] gb|KGN53718.1| | |||||
JMFF042B16 | Sequence | 641 | 001009 (27) | ref|XP_009760896.1| | 2e-83 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 567 | 001009 (27) | ref|XP_009606160.1| | 2e-57 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana tomentosiformis] |
JMFF044O10 | Sequence | 640 | 001009 (27) | ref|XP_009760896.1| | 2e-83 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 573 | 001009 (27) | ref|XP_004230631.1| | 1e-66 | PREDICTED: protein EXORDIUM-like 2 [Solanum lycopersicum] |
JMFF048A21 | Sequence | 587 | 001009 (27) | ref|XP_009760896.1| | 2e-68 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 520 | 001009 (27) | ref|XP_009606160.1| | 6e-53 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana tomentosiformis] |
JMFF048H12 | Sequence | 437 | 001009 (27) | ref|XP_009760896.1| | 6e-35 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 278 | 001009 (27) | |||
JMFN005N14 | Sequence | 637 | 001009 (27) | ref|XP_009760896.1| | 8e-88 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | |||||
JMFN007L09 | Sequence | 609 | 001009 (27) | ref|XP_009760896.1| | 6e-77 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | |||||
JMSF019P18 | Sequence | 279 | 001009 (27) | ref|XP_004230631.1| | 5e-22 | PREDICTED: protein EXORDIUM-like 2 [Solanum lycopersicum] | 724 | 001009 (27) | ref|XP_009606160.1| | 2e-89 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana tomentosiformis] |
JMSF029H23 | Sequence | 655 | 001009 (27) | ref|XP_009760896.1| | 8e-85 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 270 | 001009 (27) | |||
JMSF035G20 | Sequence | 679 | 001009 (27) | ref|XP_009760896.1| | 7e-92 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 672 | 001009 (27) | ref|XP_009760896.1| | 6e-94 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] |
JMSF050D03 | Sequence | 685 | 001009 (27) | ref|XP_009760896.1| | 5e-93 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 725 | 001009 (27) | ref|XP_009760896.1| | 3e-101 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] |
JMSF052F24 | Sequence | 635 | 001009 (27) | ref|XP_009760896.1| | 1e-79 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] | 824 | 001009 (27) | ref|XP_009760896.1| | 3e-108 | PREDICTED: protein EXORDIUM-like 2 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001009============================================1272 5 -------------------------------------->JMFF024A15 <------------------------------------------rJMFF024A15 54 --------------------------------->JMFF048H12 <------------------rJMFF048H12 58 ------------------------------------------------->JMFF042B16 <--------------------------------------------rJMFF042B16 83 --------------------------------------------->JMFF048A21 <----------------------------------------rJMFF048A21 93 ------------------------------------------------->JMFF044O10 <--------------------------------------------rJMFF044O10 109 --------------------------------------------------->JMSF029H23 <--------------------rJMSF029H23 113 --------------------->JMSF019P18 <--------------------------------------------------------rJMSF019P18 113 ----------------------------------------------------->JMSF035G20 <----------------------------------------------------rJMSF035G20 114 ------------------------------------------------->JMSF052F24 <--------------------------------------------------------------rJMSF052F24 117 ----------------------------------------------------->JMSF050D03 <--------------------------------------------------------rJMSF050D03 145 ------------------------------------------->JMFF011D10 <------------------------------------------------------rJMFF011D10 182 -------------------------------------->JMFF007D21 <----------------------------------------------------rJMFF007D21
The following clones don't have the opposite end in this pair.
------------------------------------------------->JMFN005N14- <---------------------------------------------rJMFF030C19- ----------------------------------------------->JMFN007L09-