clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003J23 | Sequence | 620 | 004576 (13) | ref|XP_006342508.1| | 331 | PREDICTED: uncharacterized protein LOC102596388 [Solanum tuberosum] | 664 | 004576 (13) | ref|XP_009802795.1| | 218 | PREDICTED: uncharacterized protein LOC104248267 [Nicotiana sylvestris] |
JMFF029J02 | Sequence | 489 | 004576 (13) | ref|XP_006342508.1| | 197 | PREDICTED: uncharacterized protein LOC102596388 [Solanum tuberosum] | 713 | 004576 (13) | ref|XP_009591250.1| | 265 | PREDICTED: uncharacterized protein LOC104088300 [Nicotiana tomentosiformis] |
JMFF034A03 | Sequence | 620 | 004576 (13) | ref|XP_006342508.1| | 331 | PREDICTED: uncharacterized protein LOC102596388 [Solanum tuberosum] | 793 | 004576 (13) | ref|XP_009802795.1| | 282 | PREDICTED: uncharacterized protein LOC104248267 [Nicotiana sylvestris] |
JMFF035P12 | Sequence | 545 | 004576 (13) | ref|XP_006342508.1| | 287 | PREDICTED: uncharacterized protein LOC102596388 [Solanum tuberosum] | |||||
JMSF020B06 | Sequence | 711 | 004576 (13) | ref|XP_006342508.1| | 341 | PREDICTED: uncharacterized protein LOC102596388 [Solanum tuberosum] | 787 | 004576 (13) | ref|XP_009591250.1| | 290 | PREDICTED: uncharacterized protein LOC104088300 [Nicotiana tomentosiformis] |
JMSF024H18 | Sequence | 696 | 004576 (13) | ref|XP_006342508.1| | 355 | PREDICTED: uncharacterized protein LOC102596388 [Solanum tuberosum] | 767 | 004576 (13) | ref|XP_009802795.1| | 282 | PREDICTED: uncharacterized protein LOC104248267 [Nicotiana sylvestris] |
JMSF041D12 | Sequence | 749 | 004576 (13) | ref|XP_006342508.1| | 388 | PREDICTED: uncharacterized protein LOC102596388 [Solanum tuberosum] | 549 | 004576 (13) | ref|XP_009802795.1| | 135 | PREDICTED: uncharacterized protein LOC104248267 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004576============================================1143 34 ------------------------------------------------------------->JMSF020B06 <--------------------------------------------------------------------rJMSF020B06 35 ------------------------------------------>JMFF029J02 <-------------------------------------------------------------rJMFF029J02 75 ------------------------------------------------------------>JMSF024H18 <------------------------------------------------------------------rJMSF024H18 79 ----------------------------------------------------------------->JMSF041D12 <----------------------------------------------rJMSF041D12 80 ----------------------------------------------------->JMFF003J23 <---------------------------------------------------------rJMFF003J23 80 ----------------------------------------------------->JMFF034A03 <--------------------------------------------------------------------rJMFF034A03
The following clones don't have the opposite end in this pair.
---------------------------------------------->JMFF035P12-