List of clones in pair P009677.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J20Sequence355000339 (18)ref|XP_009763379.1|9e-33PREDICTED: 40S ribosomal protein S12-like [Nicotiana sylvestris]669000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]
JMFF006A01Sequence422000339 (18)ref|XP_009763379.1|2e-60PREDICTED: 40S ribosomal protein S12-like [Nicotiana sylvestris]698000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]
JMFF017P06Sequence578000339 (18)emb|CDO97587.1|5e-76unnamed protein product [Coffea canephora]700000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]
JMFN012E09Sequence627000339 (18)emb|CDO97587.1|5e-79unnamed protein product [Coffea canephora]
JMFN014G06Sequence599000339 (18)emb|CDO97587.1|6e-76unnamed protein product [Coffea canephora]
JMFN014N10Sequence566000339 (18)emb|CDO97587.1|4e-76unnamed protein product [Coffea canephora]
JMFN018K14Sequence613000339 (18)emb|CDO97587.1|7e-76unnamed protein product [Coffea canephora]
JMFN028B13Sequence632000339 (18)emb|CDO97587.1|1e-75unnamed protein product [Coffea canephora]
JMFN032A01Sequence610000339 (18)emb|CDO97587.1|7e-76unnamed protein product [Coffea canephora]
JMFN032B06Sequence618000339 (18)emb|CDO97587.1|8e-76unnamed protein product [Coffea canephora]
JMFN039H14Sequence613000339 (18)emb|CDO97587.1|8e-76unnamed protein product [Coffea canephora]
JMFN043L04Sequence598000339 (18)emb|CDO97587.1|6e-76unnamed protein product [Coffea canephora]
JMFN046G24Sequence591000339 (18)emb|CDO97587.1|6e-76unnamed protein product [Coffea canephora]
JMSF047M19Sequence724000339 (18)emb|CDO97587.1|3e-75unnamed protein product [Coffea canephora]705000339 (18)emb|CDO97587.1|2e-75unnamed protein product [Coffea canephora]

Contig 339 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000339============================================ 815         
  61        --------------------------------------------------->JMFF006A01                                            
                   <-------------------------------------------------------------------------------------rJMFF006A01  
 104          --------------------------------------->JMFF003J20                                                      
                   <---------------------------------------------------------------------------------rJMFF003J20  
 104          -------------------------------------------------------------------------------------->JMSF047M19       
               <-------------------------------------------------------------------------------------rJMSF047M19  
 115         ---------------------------------------------------------------------->JMFF017P06                        
              <------------------------------------------------------------------------------------rJMFF017P06

The following clones don't have the opposite end in this pair.

                   ---------------------------------------------------------------------------->JMFN028B13-           
            ---------------------------------------------------------------------------->JMFN012E09-                  
                ------------------------------------------------------------------------>JMFN046G24-                  
     --------------------------------------------------------------------------->JMFN032B06-                          
                   ------------------------------------------------------------------->JMFN014N10-                    
                 -------------------------------------------------------------------------->JMFN032A01-               
                ------------------------------------------------------------------------>JMFN014G06-                  
     ------------------------------------------------------------------------>JMFN043L04-                             
                -------------------------------------------------------------------------->JMFN039H14-                
     -------------------------------------------------------------------------->JMFN018K14-